Gene omics information

Query gene ID PtpAffx.211421.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5984.9PtpAffx.211421.1.S1_atpmrna22379hypothetical protein-1e+0At2g18880VEL2 ((VERNALIZATION5/VIN3-LIKE))S.X.H.G.
0.4471.9Ptp.1182.1.A1_atCK089796--3e+0At2g43350ATGPX3 (GLUTATHIONE PEROXIDASE 3)S.X.H.G.
0.3357.5PtpAffx.92870.1.S1_atCX654416hypothetical protein-5e-32At4g28190ULT1 (ULTRAPETALA1)S.X.H.G.
0.1932.7Ptp.7051.1.S1_atBU883904hypothetical protein-3e+0At4g36260STY2 (STYLISH 2)S.X.H.G.
0.1321.6PtpAffx.211051.1.S1_atpmrna21711hypothetical protein-8e-6At2g39050hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.058.3PtpAffx.130982.1.S1_s_atCN520215hypothetical protein-8e-37At5g54800GPT1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.898.7GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
8.098.4GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
7.898.4GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
7.398.2GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
7.298.1GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
7.098.0GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-550PtpAffx.211422.1.S1_atpmrna22380hypothetical protein-9e-1At4g02075PIT1 (pitchoun 1)C.G.S.X.
0.041e+034PtpAffx.37974.1.A1_atCV231652--2e+0At4g22810DNA-binding protein-relatedC.G.S.X.
0.041e+034PtpAffx.206546.1.S1_atpmrna12987hypothetical protein-1e-15At2g238905' nucleotidase family proteinC.G.S.X.
0.025e+032PtpAffx.76054.1.A1_atCV227926hypothetical protein-7e-50At1g16080unknown proteinC.G.S.X.
0.045e+032PtpAffx.218704.1.S1_atpmrna34422glutathione peroxidase-1e-2At2g31570ATGPX2 (GLUTATHIONE PEROXIDASE 2)C.G.S.X.
0.015e+032PtpAffx.212302.1.S1_x_atpmrna24124hypothetical protein-5e-22At3g56370leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.025e+032PtpAffx.208077.1.S1_atpmrna16044hypothetical protein-3e-18At1g14850NUP155C.G.S.X.
0.045e+032PtpAffx.207285.1.S1_atpmrna14454hypothetical protein-9e-1At1g55140RNA binding / ribonuclease IIIC.G.S.X.
0.015e+032PtpAffx.203331.1.S1_atpmrna6625hypothetical protein-2e-6At1g56140leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt2g18880816404VEL2 ((VERNALIZATION5/VIN3-LIKE))F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.035e+032Glycine maxGmaAffx.12107.1.S1_atAW704607--6e-14At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.038e+030Hordeum vulgareHY10B09u_s_atHY10B09u--3e+0At4g00893-C.G.S.X.
0.032e+034Oryza sativaOsAffx.14153.1.S1_at---0C.G.S.X.
0.043e-136Triticum aestivumTaAffx.30551.1.S1_atCA624144--3e-1At1g10530unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1620777_atCF202020.1--1e-34At1g05720selenoprotein family proteinC.G.S.X.
0.041e-136Zea maysZm.8721.1.A1_atBM339688catalytic/ oxidoreductase, acting on NADH or NADPH-3e-1At1g10530unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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