Gene omics information

Query gene ID PtpAffx.21139.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.21139.1.S1_atBU889382hypothetical protein-2e-15At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)S.X.H.G.
0.5078.6PtpAffx.57928.2.S1_atBI120751hypothetical protein-1e+0At3g52990pyruvate kinase, putativeS.X.H.G.
0.4067.0PtpAffx.111871.2.S1_atCX170955hypothetical protein-5e+0Atmg01250-S.X.H.G.
0.2950.5PtpAffx.82253.1.A1_atCV232973hypothetical protein-2e-20At3g52990pyruvate kinase, putativeS.X.H.G.
0.2340.5Ptp.1501.1.A1_s_atCK093594hypothetical protein-4e-23At2g18190AAA-type ATPase family proteinS.X.H.G.
0.1423.5PtpAffx.114748.1.A1_atCV245313hypothetical protein-3e-14At5g42720glycosyl hydrolase family 17 proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
36.4100.0GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
12.099.2GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
5.396.9GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.896.4GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
1.785.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.583.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
1.482.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.452e-89329Ptp.4187.1.S1_atCA930797hypothetical protein-2e-9At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.436e-87321PtpAffx.59631.1.S1_s_atBI784472hypothetical protein-7e-6At1g5986017.6 kDa class I heat shock protein (HSP17.6A-CI)C.G.S.X.
0.436e-87321PtpAffx.14337.3.S1_atBU890078--6e-3At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.401e-78293PtpAffx.78723.1.S1_atDN496556--3e-2At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)C.G.S.X.
0.461e-78293PtpAffx.27422.2.A1_atCA934579hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.441e-78293PtpAffx.14337.1.S1_atCV227692--1e-3At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.425e-78291Ptp.4166.1.S1_atBU893124--9e-2At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.403e-73276PtpAffx.27422.1.S1_atBU892225hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
0.403e-73276PtpAffx.27422.1.S1_x_atBU892225hypothetical protein-4e-4At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.332e-1583Arabidopsis thalianaAt1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM---C.G.S.X.
0.392e-46186Glycine maxGmaAffx.90913.1.S1_s_atCF806638--1e-9At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.273e-1581Hordeum vulgareHY03K23u_atHY03K23u--1e-12At3g46230ATHSP17.4C.G.S.X.
0.255e-1169Oryza sativaOs01g0136200AK121025.1-17.7 kDa heat shock protein1e-4At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
0.223e-1789Triticum aestivumTa.27661.1.S1_atAJ614980heat shock protein 16.9-5e-19At3g46230ATHSP17.4C.G.S.X.
0.326e-28123Vitis vinifera1621652_atCF518056hypothetical protein LOC100262206-6e-9At5g59720HSP18.2 (heat shock protein 18.2)C.G.S.X.
0.294e-857Zea maysZm.2361.1.A1_atBM381388hypothetical protein LOC100191552-3e-17At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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