Gene omics information

Query gene ID PtpAffx.211365.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.211365.1.S1_atpmrna22277hypothetical protein-8e-5At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedS.X.H.G.
0.4471.9PtpAffx.6163.1.S1_atAJ778035hypothetical protein-1e-86At3g19820DWF1 (DWARF 1)S.X.H.G.
0.4268.6Ptp.4266.1.S1_atBU835509--2e-11At1g02970WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG)S.X.H.G.
0.4067.0PtpAffx.123129.1.A1_s_atCK091171--3e-2At4g38660thaumatin, putativeS.X.H.G.
0.4067.0PtpAffx.13609.1.S1_atCX167472hypothetical protein-2e-11At1g30440phototropic-responsive NPH3 family proteinS.X.H.G.
0.3762.3Ptp.7158.1.S1_s_atCV246958--8e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)S.X.H.G.
0.3661.6PtpAffx.106138.1.S1_atBU889364--2e+0At4g17585unknown proteinS.X.H.G.
0.2850.5Ptp.2544.1.A1_atCK087698hypothetical protein-1e-12At3g24660TMKL1 (transmembrane kinase-like 1)S.X.H.G.
0.2747.1PtpAffx.144008.1.S1_atBU833721hypothetical protein-5e-33At1g30440phototropic-responsive NPH3 family proteinS.X.H.G.
0.2747.1PtpAffx.9868.1.S1_atDN486485hypothetical protein-3e-3At3g16565ATP binding / alanine-tRNA ligase/ nucleic acid binding / nucleotide bindingS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.699.0GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
9.498.8GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
5.797.3GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
5.697.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.396.9GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.096.6GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.869e-166583PtpAffx.212480.1.S1_atpmrna24447hypothetical protein-5e-3At4g12690unknown proteinC.G.S.X.
0.042e-344PtpAffx.730.1.A1_atCV242054hypothetical protein-4e-23At1g80920J8C.G.S.X.
0.037e-342PtpAffx.50986.1.S1_atCV235492hypothetical protein-1e-11At2g22080unknown proteinC.G.S.X.
0.057e-342PtpAffx.211369.1.S1_atpmrna22286hypothetical protein-2e-2At2g40620bZIP transcription factor family proteinC.G.S.X.
0.013e-240PtpAffx.225759.1.S1_atpmrna45338--1e-4At1g29750RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1)C.G.S.X.
0.023e-240PtpAffx.224320.1.S1_atpmrna42766pleiotropic drug resistance protein-1e-12At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)C.G.S.X.
0.023e-240PtpAffx.217871.1.S1_atpmrna33308hypothetical protein-3e-16At3g14900unknown proteinC.G.S.X.
0.023e-240PtpAffx.207849.1.S1_atpmrna15583hypothetical protein-7e-7At3g19850phototropic-responsive NPH3 family proteinC.G.S.X.
0.023e-240PtpAffx.207849.1.S1_s_atpmrna15583hypothetical protein-7e-7At3g19850phototropic-responsive NPH3 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.058e-548Arabidopsis thalianaAt4g01895827073systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA---C.G.S.X.
0.052e-344Glycine maxGma.2777.1.S1_atBQ785406--1e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)C.G.S.X.
0.061e-240Hordeum vulgareHF21N04r_atHF21N04r--2e+0At4g19150ankyrin repeat family proteinC.G.S.X.
0.044e-240Oryza sativaOs06g0657901NM_193102.1--2e-1At5g11930glutaredoxin family proteinC.G.S.X.
0.068e-238Triticum aestivumTaAffx.51251.1.S1_atCA728679--2e+0At4g21500unknown proteinC.G.S.X.
0.053e-548Vitis vinifera1614975_atCD799759hypothetical protein LOC100264828-2e-1At5g14440-C.G.S.X.
0.042e+032Zea maysZmAffx.335.1.A1_atAI670522--7e-2At3g13130unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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