Gene omics information

Query gene ID PtpAffx.211016.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8497.1PtpAffx.211016.1.S1_atpmrna21649hypothetical protein-5e-29At1g10095protein prenyltransferaseS.X.H.G.
0.7192.6PtpAffx.216802.1.S1_atpmrna31828hypothetical protein-5e-6At5g20300chloroplast outer membrane protein, putativeS.X.H.G.
0.6388.1PtpAffx.208794.1.S1_atpmrna17436chromatin remodeling complex subunit-2e-93At3g06010ATCHR12S.X.H.G.
0.5984.9PtpAffx.126848.1.A1_s_atCV283487hypothetical protein-9e-24At5g67530peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinS.X.H.G.
0.4369.7PtpAffx.204435.1.S1_s_atpmrna8712condensin complex components subunit-6e-65At2g27170TTN7 (TITAN7)S.X.H.G.
0.4167.7PtpAffx.125801.1.A1_s_atBP930539hypothetical protein-6e-6At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinS.X.H.G.
0.4067.0PtpAffx.11559.3.A1_s_atCK104845hypothetical protein-3e-76At1g50030TOR (TARGET OF RAPAMYCIN)S.X.H.G.
0.4067.0PtpAffx.119547.1.S1_s_atBP928546hypothetical protein-1e-89At2g42500PP2A-4S.X.H.G.
0.3357.5PtpAffx.36162.1.S1_atBP936907--2e-6At5g53330-S.X.H.G.
0.1932.7PtpAffx.8850.1.A1_atCV238560hypothetical protein-4e-16At1g13580LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.395.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.195.5GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.293.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.490.4GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.590965PtpAffx.150195.1.S1_atCX172926hypothetical protein-5e-6At1g10095protein prenyltransferaseC.G.S.X.
0.590965PtpAffx.150195.1.S1_s_atCX172926hypothetical protein-5e-6At1g10095protein prenyltransferaseC.G.S.X.
0.283e-114412Ptp.2738.1.A1_atBU894025hypothetical protein-3e-1At3g46910ubiquitin protein ligase bindingC.G.S.X.
0.035e-240PtpAffx.204946.1.S1_atpmrna9790hypothetical protein-2e-2At2g42410ZFP11 (ZINC FINGER PROTEIN 11)C.G.S.X.
0.012e-138PtpAffx.225148.1.S1_atpmrna44281BED finger-nbs-lrr resistance protein-4e-1At3g22450structural constituent of ribosomeC.G.S.X.
0.028e-136PtpAffx.212894.1.S1_atpmrna25237hypothetical protein-2e+0At5g57000unknown proteinC.G.S.X.
0.018e-136PtpAffx.208861.1.S1_atpmrna17564rna-dependent RNA polymerase-7e-9At1g14790RDR1 (RNA-DEPENDENT RNA POLYMERASE 1)C.G.S.X.
0.028e-136Ptp.2446.1.S1_atBU886389hypothetical protein-1e+0At2g36881unknown proteinC.G.S.X.
0.028e-136Ptp.2446.1.S1_s_atBU886389hypothetical protein-1e+0At2g36881unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.235e-29129Arabidopsis thalianaAt1g10095837545protein prenyltransferaseF:protein prenyltransferase activity;P:protein amino acid prenylation;C:cellular_component unknown;MPFO---C.G.S.X.
0.038e-136Glycine maxGmaAffx.77267.1.S1_atBG551392--1e+1At5g20180ribosomal protein L36 family proteinC.G.S.X.
0.024e+032Hordeum vulgareHS06F17u_atHS06F17u--7e-1At5g1838040S ribosomal protein S16 (RPS16C)C.G.S.X.
0.024e+034Oryza sativaOs11g06097009639.m03610-Disease resistance protein family protein2e+0At1g15340MBD10C.G.S.X.
0.032e+034Triticum aestivumTa.9354.3.S1_a_atAL830577--1e-1At3g61415ASK21 (ARABIDOPSIS SKP1-LIKE 21)C.G.S.X.
0.339e-28123Vitis vinifera1614160_atCF208385hypothetical protein LOC100255283-2e-8At1g10095protein prenyltransferaseC.G.S.X.
0.022e-136Zea maysZmAffx.713.1.A1_atAI737188--8e-1At2g37140terpene synthase/cyclase-relatedC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage