Gene omics information

Query gene ID PtpAffx.210950.1.S1_at
Gene name cationic amino acid transporter
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4875.4PtpAffx.210950.1.S1_atpmrna21514cationic amino acid transporter-7e-14At4g21120AAT1 (AMINO ACID TRANSPORTER 1)S.X.H.G.
0.3357.5Ptp.7372.2.S1_a_atCV269484hypothetical protein-6e+0At5g53420-S.X.H.G.
0.3357.5PtpAffx.210452.1.S1_atpmrna20524--1e-37At1g49010myb family transcription factorS.X.H.G.
0.3357.5PtpAffx.204875.1.S1_s_atpmrna9632hypothetical protein-2e-22At5g19855unknown proteinS.X.H.G.
0.2950.5PtpAffx.212285.1.S1_atpmrna24084hypothetical protein-3e-3At4g12910scpl20 (serine carboxypeptidase-like 20)S.X.H.G.
0.2950.5PtpAffx.208409.1.S1_s_atpmrna16713hypothetical protein-9e-4At1g69870proton-dependent oligopeptide transport (POT) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.199.5GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
14.999.5GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
8.298.5GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
7.798.3GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.396.9GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
5.196.8GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.796.3GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.193.2GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.092.9GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.992.5GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.204e-47190PtpAffx.67898.1.A1_atBP932580cationic amino acid transporter-3e-1At4g21120AAT1 (AMINO ACID TRANSPORTER 1)C.G.S.X.
0.052e-1171PtpAffx.200298.1.S1_atpmrna590--6e-8At2g34960CAT5 (CATIONIC AMINO ACID TRANSPORTER 5)C.G.S.X.
0.013e-138PtpAffx.200139.1.S1_atpmrna258hypothetical protein-2e-30At1g31740BGAL15 (beta-galactosidase 15)C.G.S.X.
0.011e+036PtpAffx.222045.1.S1_atpmrna39247hypothetical protein-2e+0At4g21310unknown proteinC.G.S.X.
0.011e+036PtpAffx.217375.1.S1_atpmrna32606hypothetical protein-6e-1At2g33740CUTAC.G.S.X.
0.011e+036PtpAffx.202134.1.S1_atpmrna4263hypothetical protein-1e-101At3g20050ATTCP-1C.G.S.X.
0.011e+036PtpAffx.117551.1.S1_s_atCX178300hypothetical protein-4e-29At5g50000protein kinase, putativeC.G.S.X.
0.011e+036Ptp.226.1.S1_atCV241733hypothetical protein-7e-78At3g20050ATTCP-1C.G.S.X.
0.015e+034PtpAffx.30884.2.A1_atCV257817--5e+0At1g72170unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.257e-1479Arabidopsis thalianaAt4g21120827860AAT1 (AMINO ACID TRANSPORTER 1)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.---C.G.S.X.
0.021e+036Glycine maxGmaAffx.12874.1.A1_atBE807727--4e+0At5g65210TGA1C.G.S.X.
0.022e+034Hordeum vulgareHB08F22r_x_atHB08F22r--3e+0At3g07570membrane protein, putativeC.G.S.X.
0.047e-344Oryza sativaOsAffx.25529.1.S1_at---0C.G.S.X.
0.029e-136Triticum aestivumTaAffx.78636.1.S1_atCA729780--4e+0At5g38180protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.143e-1685Vitis vinifera1612194_atCD799692hypothetical protein LOC100263534-7e-2At5g14420RGLG2 (RING domain Ligase2)C.G.S.X.
0.026e+032Zea maysZmAffx.1083.1.A1_atAI974922--1e+0At1g59830PP2A-1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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