Gene omics information

Query gene ID PtpAffx.210935.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.210935.1.S1_atpmrna21488hypothetical protein-1e-5At3g05400sugar transporter, putativeS.X.H.G.
0.6488.4PtpAffx.39799.1.A1_atCV228717hypothetical protein-6e-1At5g19810proline-rich extensin-like family proteinS.X.H.G.
0.6388.1PtpAffx.225830.1.S1_atpmrna45443hypothetical protein-5e-4At1g78320ATGSTU23 (GLUTATHIONE S-TRANSFERASE TAU 23)S.X.H.G.
0.5784.2PtpAffx.82382.1.A1_atCV262006hypothetical protein-3e-2At2g31940unknown proteinS.X.H.G.
0.5380.5PtpAffx.213042.1.S1_atpmrna25523hypothetical protein-7e-15At5g51780basix helix-loop-helix (bHLH) family proteinS.X.H.G.
0.5078.6PtpAffx.114935.1.A1_atCV240866hypothetical protein-2e-2At3g46620zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4875.4PtpAffx.149510.2.S1_atCA821947--7e+0At2g47360unknown proteinS.X.H.G.
0.4369.7PtpAffx.219974.1.S1_atpmrna36177hypothetical protein-2e-3At2g45040matrix metalloproteinaseS.X.H.G.
0.4268.6PtpAffx.95587.1.A1_atCV240701hypothetical protein-1e+0At5g53280PDV1 (PLASTID DIVISION1)S.X.H.G.
0.3964.6PtpAffx.8582.1.S1_atCV262556--2e-1At1g19310zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.599.7GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
18.999.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
15.299.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
11.499.2GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
8.598.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
1.279.6GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.178.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.178.0GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
1.076.2GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8901552PtpAffx.222771.1.S1_atpmrna40410hypothetical protein-1e-5At1g08930ERD6 (EARLY RESPONSE TO DEHYDRATION 6)C.G.S.X.
0.341e-120434PtpAffx.222767.1.S1_atpmrna40406hypothetical protein-8e-1At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.341e-120434PtpAffx.222767.1.S1_s_atpmrna40406hypothetical protein-8e-1At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)C.G.S.X.
0.395e-1893PtpAffx.222752.1.S1_atpmrna40381hypothetical protein-6e-5At3g05400sugar transporter, putativeC.G.S.X.
0.142e-1481PtpAffx.210934.1.S1_atpmrna21486hypothetical protein-1e-11At1g54730sugar transporter, putativeC.G.S.X.
0.042e-861PtpAffx.9823.1.S1_s_atBU887448hypothetical protein-3e-4At1g08900carbohydrate transmembrane transporterC.G.S.X.
0.092e-861PtpAffx.222772.1.S1_atpmrna40411hypothetical protein-4e-1At2g36870xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
0.066e-859PtpAffx.32256.1.A1_atCK091464hypothetical protein-3e-6At2g48020sugar transporter, putativeC.G.S.X.
0.066e-859PtpAffx.32256.1.A1_a_atCK091464hypothetical protein-3e-6At2g48020sugar transporter, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-552Arabidopsis thalianaAt3g05400819704sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA---C.G.S.X.
0.031e-242Glycine maxGma.4058.1.S1_atAW310338--3e-9At5g18840sugar transporter, putativeC.G.S.X.
0.028e-238Hordeum vulgareContig12678_atContig12678--2e-7At1g54730sugar transporter, putativeC.G.S.X.
0.031e-346Oryza sativaOs03g0363600AK106658.1-Sugar transporter-like protein4e-3At5g18840sugar transporter, putativeC.G.S.X.
0.027e-136Triticum aestivumTa.30759.1.S1_x_atCD911744--1e-2At1g19450integral membrane protein, putative / sugar transporter family proteinC.G.S.X.
0.023e+032Vitis vinifera1618166_atCD011399--3e+0At5g25210unknown proteinC.G.S.X.
0.035e-342Zea maysZm.18248.1.A1_atCN844167solute carrier family 2, facilitated glucose transporter member 8-1e-1At3g05160sugar transporter, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage