Gene omics information

Query gene ID PtpAffx.210864.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.210864.1.S1_atpmrna21339hypothetical protein-1e-64At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)S.X.H.G.
0.4471.9PtpAffx.2877.3.S1_s_atCK096556hypothetical protein-2e-9At3g15880protein bindingS.X.H.G.
0.4067.0PtpAffx.209374.1.S1_s_atpmrna18566hypothetical protein-1e-65At2g39260RNA binding / binding / protein bindingS.X.H.G.
0.2950.5PtpAffx.200586.1.S1_s_atpmrna1161hypothetical protein-5e-46At5g64550loricrin-relatedS.X.H.G.
0.2238.3PtpAffx.5963.1.S1_s_atCV243600hypothetical protein-7e-112At2g23980ATCNGC6S.X.H.G.
0.1830.8PtpAffx.131450.1.S1_atCK103111hypothetical protein-1e-32At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.096.6GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.794.7GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.791.8GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.289.3GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0004205PtpAffx.210864.1.S1_x_atpmrna21339hypothetical protein-1e-64At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
1.0004205PtpAffx.210864.1.S1_s_atpmrna21339hypothetical protein-1e-64At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.6001477Ptp.6439.1.S1_s_atBU874074hypothetical protein-4e-54At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.6001477Ptp.6439.1.S1_atBU874074hypothetical protein-4e-54At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.5101130Ptp.3269.1.S1_s_atCN523535hypothetical protein-1e-26At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.345e-127456PtpAffx.26930.1.S1_atCV225552hypothetical protein-1e-4At4g02150MOS6 (MODIFIER OF SNC1, 6)C.G.S.X.
0.412e-117424PtpAffx.4546.1.S1_atCV260331hypothetical protein-8e-113At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.264e-41171PtpAffx.4546.2.S1_a_atCV244444hypothetical protein-2e-13At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.321e-31139PtpAffx.52325.1.S1_s_atCX659919hypothetical protein-3e-28At4g02150MOS6 (MODIFIER OF SNC1, 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.461e-64248Arabidopsis thalianaAt4g16143827302IMPA-2 (IMPORTIN ALPHA ISOFORM 2)Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.---C.G.S.X.
0.540741Glycine maxGma.7528.2.S1_atBM891312--3e-49At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.422e-83309Hordeum vulgareContig4129_atContig4129--9e-26At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.425e-66254Oryza sativaOs01g0253300AB004660.1-Importin alpha 26e-24At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.401e-80301Triticum aestivumTa.28018.1.S1_atCK159354--2e-27At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)C.G.S.X.
0.266e-49194Vitis vinifera1607723_atCF568821--5e-18At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
0.318e-49194Zea maysZm.4271.2.S1_a_atAY103821.1hypothetical protein LOC100193437-2e-20At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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