Gene omics information

Query gene ID PtpAffx.210842.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.210842.1.S1_atpmrna21295hypothetical protein-2e-59At1g56590clathrin adaptor complexes medium subunit family proteinS.X.H.G.
0.6086.0Ptp.3112.1.S1_s_atBU898191hypothetical protein-5e-1At2g46090diacylglycerol kinase family proteinS.X.H.G.
0.4673.7PtpAffx.43571.1.S1_atBU812831hypothetical protein-2e-23At2g39630glycosyl transferase family 2 proteinS.X.H.G.
0.4067.0PtpAffx.14248.2.S1_atCV257447hypothetical protein-3e-19At4g36440unknown proteinS.X.H.G.
0.2950.5PtpAffx.60823.1.S1_atCV261988hypothetical protein-2e-34At2g15240UNC-50 family proteinS.X.H.G.
0.2034.6Ptp.8046.1.S1_s_atBU885382hypothetical protein-2e-8At3g26935zinc finger (DHHC type) family proteinS.X.H.G.
0.1321.6PtpAffx.11716.2.S1_a_atCV245206--2e-18At1g30970SUF4 (suppressor of FRIGIDA4)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.594.3GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
3.494.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.892.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.289.3GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9401871PtpAffx.215902.1.S1_atpmrna30363hypothetical protein-1e-66At1g56590clathrin adaptor complexes medium subunit family proteinC.G.S.X.
0.172e-50200PtpAffx.129589.1.A1_atCK088077--2e+0At3g48490unknown proteinC.G.S.X.
0.019e-136PtpAffx.209381.1.S1_atpmrna18581hypothetical protein-4e-3At1g13040pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.013e+034PtpAffx.55815.1.A1_atCK097850hypothetical protein-2e-4At4g08980F-box family protein (FBW2)C.G.S.X.
0.023e+034PtpAffx.55815.2.A1_atCV250444--3e-4At4g08980F-box family protein (FBW2)C.G.S.X.
0.023e+034PtpAffx.55815.2.A1_a_atCV250444hypothetical protein-3e-4At4g08980F-box family protein (FBW2)C.G.S.X.
0.013e+034PtpAffx.29592.1.S1_atCV278968hypothetical protein-1e-38At1g72280AERO1 (Arabidopsis endoplasmic reticulum oxidoreductins 1)C.G.S.X.
0.013e+034PtpAffx.209953.1.S1_atpmrna19627hypothetical protein-7e-13At3g15200pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.013e+034PtpAffx.207081.1.S1_atpmrna14038cation proton exchanger-8e-2At1g08140ATCHX6A (CATION/H+ EXCHANGER 6A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.372e-59230Arabidopsis thalianaAt1g56590842113clathrin adaptor complexes medium subunit family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP---C.G.S.X.
0.517e-91335Glycine maxGmaAffx.49577.1.S1_atBU549109--4e-20At1g56590clathrin adaptor complexes medium subunit family proteinC.G.S.X.
0.025e+032Hordeum vulgareEBro03_SQ005_I09_atEBro03_SQ005_I09--8e-1At1g50720stigma-specific Stig1 family proteinC.G.S.X.
0.111e-1275Oryza sativaOs05g0383100AK121835.1-Clathrin adaptor complex, medium chain familyprotein3e-7At1g56590clathrin adaptor complexes medium subunit family proteinC.G.S.X.
0.026e-136Triticum aestivumTa.6901.2.A1_atCD491465--2e-11At2g47590PHR2 (photolyase/blue-light receptor 2)C.G.S.X.
0.023e+032Vitis vinifera1611334_atCF568953--1e+0At4g38495-C.G.S.X.
0.103e-1065Zea maysZm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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