Gene omics information

Query gene ID PtpAffx.210790.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7594.1PtpAffx.210790.1.S1_s_atpmrna21170hypothetical protein-4e-27At4g25360-S.X.H.G.
0.6187.0PtpAffx.200273.1.S1_atpmrna536hypothetical protein-4e-11At3g26935zinc finger (DHHC type) family proteinS.X.H.G.
0.5582.2PtpAffx.39223.1.A1_atCK101913hypothetical protein-9e-34At2g43040NPG1 (no pollen germination 1)S.X.H.G.
0.4673.7PtpAffx.206376.1.S1_atpmrna12662hypothetical protein-3e-62At2g19400protein kinase, putativeS.X.H.G.
0.4067.0PtpAffx.163204.1.S1_s_atCF229103hypothetical protein-2e+0At1g23150unknown proteinS.X.H.G.
0.3255.2PtpAffx.120529.1.A1_s_atCV275657hypothetical protein-2e-7At1g72170unknown proteinS.X.H.G.
0.3153.7PtpAffx.213752.1.S1_atpmrna26858glycosyltransferase, CAZy family GT8-5e-18At2g38650GAUT7 (GALACTURONOSYLTRANSFERASE 7)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.699.7GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
12.199.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
9.998.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
9.598.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
6.097.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
5.396.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
1.785.5GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
1.583.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
1.482.3GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
1.381.0GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0002771PtpAffx.210790.1.S1_atpmrna21170hypothetical protein-4e-27At4g25360-C.G.S.X.
0.7001164PtpAffx.161194.1.S1_atCN549561hypothetical protein-5e-13At4g25360-C.G.S.X.
0.145e-58226PtpAffx.43659.1.A1_atCV263005hypothetical protein-4e+0At5g51640YLS7C.G.S.X.
0.032e-138PtpAffx.212414.1.S1_atpmrna24315hypothetical protein-2e-3At2g40150-C.G.S.X.
0.022e-138PtpAffx.146877.1.S1_atCV258755hypothetical protein-4e-1At5g05500pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.022e-138Ptp.3659.1.A1_s_atDN492368hypothetical protein-2e+0At4g01080unknown proteinC.G.S.X.
0.011e+036PtpAffx.211465.1.S1_atpmrna22472hypothetical protein-4e-26At2g45380-C.G.S.X.
0.001e+036PtpAffx.203832.1.S1_atpmrna7571hypothetical protein-3e-13At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)C.G.S.X.
0.011e+036Ptp.631.1.S1_atCK088725--1e-10At5g61140DEAD box RNA helicase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.294e-27123Arabidopsis thalianaAt4g25360828639-F:unknown;P:biological_process unknown;C:unknown;P---C.G.S.X.
0.102e-20101Glycine maxGmaAffx.53112.1.S1_atBE211446--6e-20At4g25360-C.G.S.X.
0.025e+032Hordeum vulgarerbaal31o15_atrbaal31o15--3e-1At1g77650F-box family proteinC.G.S.X.
0.194e-757Oryza sativaOs01g0914800AK102791.1-Protein of unknown function DUF231 domaincontaining protein2e-17At4g25360-C.G.S.X.
0.072e-1687Triticum aestivumTa.27002.1.S1_atCD373695--4e-6At5g51640YLS7C.G.S.X.
0.368e-38157Vitis vinifera1612946_atCF510773hypothetical protein LOC100244660-2e-18At4g25360-C.G.S.X.
0.011e+034Zea maysZm.18076.1.S1_atCF629599pyrrolidone carboxyl peptidase-3e-9At1g23440pyrrolidone-carboxylate peptidase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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