Gene omics information

Query gene ID PtpAffx.210644.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.210644.1.S1_atpmrna20878hypothetical protein-5e-8At3g48520CYP94B3S.X.H.G.
0.4875.4PtpAffx.211759.1.S1_x_atpmrna23048hypothetical protein-4e-114At2g47650UXS4 (UDP-XYLOSE SYNTHASE 4)S.X.H.G.
0.4167.7Ptp.2207.1.S1_atBU833892hypothetical protein-6e-18At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeS.X.H.G.
0.3357.5Ptp.6495.1.S1_s_atBU897639hypothetical protein-9e-17At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeS.X.H.G.
0.3153.7PtpAffx.54064.1.S1_s_atBI131020hypothetical protein-3e-71At1g14830ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)S.X.H.G.
0.3052.0PtpAffx.131798.1.S1_atDN501875hypothetical protein-5e+0At5g23920unknown proteinS.X.H.G.
0.2950.5PtpAffx.11524.3.S1_atCV272635hypothetical protein-4e-28At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeS.X.H.G.
0.2747.1PtpAffx.18039.1.A1_atCV263969--1e-3At2g47060serine/threonine protein kinase, putativeS.X.H.G.
0.2340.5PtpAffx.41585.1.S1_atCX660062precursor of transferase serine hydroxymethyltransferase 3-0At5g26780SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2)S.X.H.G.
0.2340.5PtpAffx.210790.1.S1_s_atpmrna21170hypothetical protein-4e-27At4g25360-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.999.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
9.498.8GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
8.898.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
8.798.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.497.7GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
4.495.9GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-20101PtpAffx.201039.1.S1_atpmrna2036cytochrome P450-2e-1At3g01900CYP94B2C.G.S.X.
0.017e-550PtpAffx.222855.1.S1_atpmrna40538cytochrome P450-2e-5At3g56630CYP94D2C.G.S.X.
0.024e-344PtpAffx.4172.1.S1_atCV238806cytochrome P450-4e-6At3g56630CYP94D2C.G.S.X.
0.024e-344Ptp.2193.1.A1_s_atCK112033cytochrome P450 /// cytochrome P450 /// cytochrome P450-4e-5At3g56630CYP94D2C.G.S.X.
0.023e-138PtpAffx.224872.1.S1_atpmrna43764--9e-22At2g45510CYP704A2C.G.S.X.
0.023e-138PtpAffx.224872.1.S1_s_atpmrna43764cytochrome P450-9e-22At2g45510CYP704A2C.G.S.X.
0.033e-138PtpAffx.216564.1.S1_s_atpmrna31415cytochrome P450 /// cytochrome P450-2e-4At1g13140CYP86C3C.G.S.X.
0.013e-138PtpAffx.210867.1.S1_atpmrna21344hypothetical protein-1e-35At2g47500ATP binding / microtubule motorC.G.S.X.
0.033e-138PtpAffx.208271.1.S1_atpmrna16458cytochrome P450 /// cytochrome P450-2e-4At1g13140CYP86C3C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.145e-859Arabidopsis thalianaAt3g48520824011CYP94B3member of CYP94B---C.G.S.X.
0.021e+036Glycine maxGmaAffx.85739.1.S1_atBQ079993--6e-8At5g14790bindingC.G.S.X.
0.022e+034Hordeum vulgareContig19897_atContig19897--1e-1At2g21910CYP96A5C.G.S.X.
0.024e-138Oryza sativaOs05g0382500AK107084.1--9e-1At3g20850proline-rich family proteinC.G.S.X.
0.025e-240Triticum aestivumTa.3653.1.A1_atCD454215--1e+0At4g00895ATP synthase delta chain-relatedC.G.S.X.
0.022e-136Vitis vinifera1617051_atCF210616hypothetical protein LOC100255590-2e-1At2g23220CYP81D6C.G.S.X.
0.023e-136Zea maysZm.3869.1.A1_atCA399747protein YIF1A-3e-21At1g30890integral membrane HRF1 family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage