Gene omics information

Query gene ID PtpAffx.210531.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.210531.1.S1_atpmrna20646hypothetical protein-3e-4At1g18950aminoacyl-tRNA synthetase familyS.X.H.G.
0.5784.2PtpAffx.100628.1.S1_s_atCF232037hypothetical protein-2e+0At2g38350unknown proteinS.X.H.G.
0.5582.2PtpAffx.212736.1.S1_s_atpmrna24914hypothetical protein-3e-18At1g18950aminoacyl-tRNA synthetase familyS.X.H.G.
0.5279.4PtpAffx.202859.1.S1_atpmrna5655hypothetical protein-3e-2At1g72770HAB1 (HOMOLOGY TO ABI1)S.X.H.G.
0.5178.9PtpAffx.150427.1.S1_atBU832236hypothetical protein-4e-37At1g43190polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putativeS.X.H.G.
0.5178.9PtpAffx.61544.1.A1_atCA931045hypothetical protein-4e-19At3g59380FTA (FARNESYLTRANSFERASE A)S.X.H.G.
0.5078.6PtpAffx.149265.1.S1_s_atCV131132hypothetical protein-3e-54At2g14260PIPS.X.H.G.
0.4875.4PtpAffx.156707.1.S1_s_atBU873655hypothetical protein-4e-4At2g03110RNA binding / nucleic acid bindingS.X.H.G.
0.4673.7PtpAffx.496.3.S1_atAJ775413hypothetical protein-3e-4At5g56680SYNC1S.X.H.G.
0.4572.3PtpAffx.59404.1.S1_atBI138852hypothetical protein-2e-40At3g23300dehydration-responsive protein-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.495.9GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.594.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.791.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-446PtpAffx.28120.1.S1_atCK096668hypothetical protein-7e-28At3g55020RabGAP/TBC domain-containing proteinC.G.S.X.
0.022e-240PtpAffx.207437.1.S1_atpmrna14768hypothetical protein-3e-9At5g65890ACR1 (ACT Domain Repeat 1)C.G.S.X.
0.038e-238PtpAffx.658.4.S1_atBU814411--1e+0At3g48185unknown proteinC.G.S.X.
0.038e-238PtpAffx.128871.1.S1_atCV271857hypothetical protein-3e-2At3g25680-C.G.S.X.
0.023e-136PtpAffx.4965.1.A1_atCV267447--2e-4At4g35790ATPLDDELTAC.G.S.X.
0.021e+034PtpAffx.223157.1.S1_atpmrna41019hypothetical protein-9e+0At2g47760ALG3C.G.S.X.
0.011e+034PtpAffx.208622.1.S1_s_atpmrna17117hypothetical protein-1e-31At1g27880ATP-dependent DNA helicase, putativeC.G.S.X.
0.031e+034PtpAffx.12845.1.S1_s_atCV240601hypothetical protein-9e-24At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.031e+034PtpAffx.12845.1.S1_atCV240601hypothetical protein-9e-24At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-446Arabidopsis thalianaAt1g18950838476aminoacyl-tRNA synthetase familyF:aminoacyl-tRNA ligase activity;P:biological_process unknown;C:unknown;MOFBPVA---C.G.S.X.
0.048e-238Glycine maxGmaAffx.68336.1.S1_atBI316593--3e-4At4g33490aspartic-type endopeptidaseC.G.S.X.
0.031e-136Hordeum vulgareContig15190_atContig15190--5e+0At5g03130unknown proteinC.G.S.X.
0.035e-136Oryza sativaOs.6730.1.S1_at---0C.G.S.X.
0.046e-238Triticum aestivumTaAffx.5238.1.S1_atCA718125--9e-1At4g17460HAT1C.G.S.X.
0.041e+032Vitis vinifera1616417_atCB975222hypothetical protein LOC100257171-2e-2At4g21610LOL2 (LSD ONE LIKE 2)C.G.S.X.
0.032e+032Zea maysZm.15381.1.A1_atBM350025--5e+0At4g21310unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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