Gene omics information

Query gene ID PtpAffx.210274.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.210274.1.S1_atpmrna20208hypothetical protein-3e-12At3g49200unknown proteinS.X.H.G.
0.6187.0PtpAffx.60647.1.S1_atCV266317hypothetical protein-3e-55At1g58440XF1S.X.H.G.
0.5784.2PtpAffx.214507.1.S1_atpmrna28213hypothetical protein-4e-47At2g12646-S.X.H.G.
0.3255.2PtpAffx.203194.1.S1_s_atpmrna6331hypothetical protein-3e-5At2g45430DNA-binding protein-relatedS.X.H.G.
0.3255.2PtpAffx.54796.1.S1_atDN497368aminophospholipid ATPase /// aminophospholipid ATPase-3e-1At1g47970unknown proteinS.X.H.G.
0.3255.2PtpAffx.9749.1.A1_atDN491489hypothetical protein-4e+0At5g04790unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.598.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.797.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
5.497.0GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.796.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.696.2GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-240PtpAffx.219764.1.S1_atpmrna35822hypothetical protein-3e-6At2g37035unknown proteinC.G.S.X.
0.016e-240PtpAffx.213758.1.S1_atpmrna26866hypothetical protein-2e-1At4g16162protein bindingC.G.S.X.
0.016e-240PtpAffx.206899.1.S1_atpmrna13696hypothetical protein-3e+0At5g6751060S ribosomal protein L26 (RPL26B)C.G.S.X.
0.013e-138PtpAffx.32356.3.S1_atDN494535hypothetical protein-2e-4At3g57270BG1 (BETA-1,3-GLUCANASE 1)C.G.S.X.
0.013e-138PtpAffx.19046.1.S1_atCV280497dihydrofolate reductase-thymidylate synthase-7e-1At2g16370THY-1 (THYMIDYLATE SYNTHASE 1)C.G.S.X.
0.023e-138PtpAffx.131847.1.S1_atDN500639hypothetical protein-5e-22At5g35970DNA-binding protein, putativeC.G.S.X.
0.011e+036PtpAffx.4750.1.S1_atAJ767836hypothetical protein-3e-40At2g22540SVP (SHORT VEGETATIVE PHASE)C.G.S.X.
0.011e+036PtpAffx.35608.1.S1_atCV229376hypothetical protein-3e-8At5g24260prolyl oligopeptidase family proteinC.G.S.X.
0.011e+036PtpAffx.218576.1.S1_s_atpmrna34238pho1-like protein-3e-16At2g03240-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.143e-1273Arabidopsis thalianaAt3g49200824081unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMA---C.G.S.X.
0.053e-757Glycine maxGma.13644.1.S1_atCD412201--9e-7At3g49200unknown proteinC.G.S.X.
0.021e+034Hordeum vulgareHY03O05u_atHY03O05u--4e+0At5g40330MYB23 (MYB DOMAIN PROTEIN 23)C.G.S.X.
0.011e+036Oryza sativaOs08g0222100AK070815.1-Conserved hypothetical protein2e+0At1g02710glycine-rich proteinC.G.S.X.
0.028e-136Triticum aestivumTaAffx.114109.1.S1_atCA598519--3e+0At4g35490MRPL11 (MITOCHONDRIAL RIBOSOMAL PROTEIN L11)C.G.S.X.
0.102e-859Vitis vinifera1618967_atCB979335hypothetical protein LOC100264132-1e+0At3g49200unknown proteinC.G.S.X.
0.015e+032Zea maysZm.6713.1.A1_atCK828034ATP-citrate synthase-1e-36At1g09430ACLA-3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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