Gene omics information

Query gene ID PtpAffx.209626.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3357.5PtpAffx.209626.1.S1_atpmrna19021hypothetical protein-3e-113At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)S.X.H.G.
0.4067.0PtpAffx.213760.1.S1_s_atpmrna26870hypothetical protein-5e-20At2g43800formin homology 2 domain-containing protein / FH2 domain-containing proteinS.X.H.G.
0.1932.7PtpAffx.224868.1.S1_atpmrna43757--8e-5At1g67520lectin protein kinase family proteinS.X.H.G.
0.1219.6PtpAffx.201638.1.S1_atpmrna3250hypothetical protein-1e-23At1g27620transferase family proteinS.X.H.G.
0.1118.1PtpAffx.64361.1.S1_s_atCV228112hypothetical protein-5e-63At5g65700BAM1 (BARELY ANY MERISTEM 1)S.X.H.G.
0.0914.6PtpAffx.82034.1.A1_atCV262920hypothetical protein-7e+0At4g21850methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.897.4GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
4.596.1GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.195.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.092.9GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.590.9GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001969PtpAffx.209626.1.S1_s_atpmrna19021hypothetical protein-3e-113At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.342e-121436PtpAffx.96735.1.A1_atCK089168--2e-14At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.157e-72272PtpAffx.154075.1.A1_atCV267211hypothetical protein-2e-3At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.082e-29131Ptp.7733.2.S1_atCV260345--2e-3At4g10100CNX7C.G.S.X.
0.078e-1685PtpAffx.216145.1.S1_atpmrna30754hypothetical protein-5e-12At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)C.G.S.X.
0.108e-1375Ptp.4270.1.S1_atDN499659--8e-5At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.108e-1375Ptp.4270.1.S1_s_atDN499659hypothetical protein-8e-5At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.015e-550PtpAffx.208260.1.S1_atpmrna16439hypothetical protein-1e-28At1g67720leucine-rich repeat family protein / protein kinase family proteinC.G.S.X.
0.032e-448PtpAffx.156996.1.S1_atCV266889hypothetical protein-9e-13At4g23740leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.533e-113408Arabidopsis thalianaAt4g22130828302SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)F:in 6 functions;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA---C.G.S.X.
0.545e-153541Glycine maxGmaAffx.36693.1.S1_atBG881453--2e-70At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.396e-70264Hordeum vulgareContig6843_atContig6843--2e-32At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.263e-44180Oryza sativaOs06g0634500AK111551.1-Protein kinase domain containing protein1e-13At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.392e-53210Triticum aestivumTa.27027.1.S1_s_atCA596068--9e-34At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.343e-101367Vitis vinifera1607816_atCF216068hypothetical protein LOC100248686-1e-28At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.252e-859Zea maysZm.11939.1.A1_atCF624620--7e-21At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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