Gene omics information

Query gene ID PtpAffx.209472.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5784.2PtpAffx.209472.1.S1_atpmrna18782hypothetical protein-5e-1At1g72030GCN5-related N-acetyltransferase (GNAT) family proteinS.X.H.G.
0.6791.1PtpAffx.212377.1.S1_s_atpmrna24254white-brown-complex ABC transporter family-4e-6At1g71960ABC transporter family proteinS.X.H.G.
0.5078.6PtpAffx.31347.1.A1_atCV239271AP2/ERF domain-containing transcription factor-4e-8At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)S.X.H.G.
0.4067.0PtpAffx.212377.1.S1_x_atpmrna24254white-brown-complex ABC transporter family-4e-6At1g71960ABC transporter family proteinS.X.H.G.
0.2136.5PtpAffx.200291.1.S1_atpmrna576hypothetical protein-6e-1At5g14450GDSL-motif lipase/hydrolase family proteinS.X.H.G.
0.0914.6PtpAffx.61387.1.A1_atBP935699hypothetical protein-3e-1At4g349301-phosphatidylinositol phosphodiesterase-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.699.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
8.898.7GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
7.098.0GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
6.998.0GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
5.597.1GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.497.0GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.696.2GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.195.5GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.083e-344PtpAffx.207498.1.S1_atpmrna14887hypothetical protein-2e-10At3g21200unknown proteinC.G.S.X.
0.022e-138PtpAffx.211919.1.S1_atpmrna23409hypothetical protein-2e-16At4g26680pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.026e-136PtpAffx.35639.1.A1_atBP936097hypothetical protein-3e-18At1g65650UCH2C.G.S.X.
0.016e-136PtpAffx.213122.1.S1_atpmrna25681hypothetical protein-5e-21At5g28530FRS10 (FAR1-related sequence 10)C.G.S.X.
0.026e-136PtpAffx.208907.1.S1_atpmrna17669hypothetical protein-5e-122At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.016e-136PtpAffx.205691.1.S1_atpmrna11241copalyl diphosphate synthase-4e-19At4g02780GA1 (GA REQUIRING 1)C.G.S.X.
0.026e-136PtpAffx.152018.1.S1_a_atCX169656--3e-1At1g67950RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.026e-136PtpAffx.112555.2.S1_s_atCV242108hypothetical protein-2e-96At1g15110phosphatidyl serine synthase family proteinC.G.S.X.
0.026e-136Ptp.3400.2.S1_a_atBU813104hypothetical protein-5e+0At4g31354unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Arabidopsis thalianaAt1g72030843534GCN5-related N-acetyltransferase (GNAT) family proteinF:N-acetyltransferase activity;P:metabolic process;C:unknown;PBO---C.G.S.X.
0.033e+034Glycine maxGmaAffx.2740.1.A1_atAW349339Dof11-2e-1At2g04450ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6)C.G.S.X.
0.021e+130Hordeum vulgareContig16216_atContig16216--6e-3At5g55470ATNHX3C.G.S.X.
0.029e-136Oryza sativaOs.26853.1.A1_at---0C.G.S.X.
0.032e+034Triticum aestivumTaAffx.38378.1.S1_atBJ235560--2e+0At5g28630glycine-rich proteinC.G.S.X.
0.035e-134Vitis vinifera1618141_atCD798593--1e-15At1g71230CSN5B (COP9-SIGNALOSOME 5B)C.G.S.X.
0.023e+032Zea maysZmAffx.963.1.A1_atAI833792--8e-1At4g04620ATG8B (autophagy 8b)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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