Gene omics information

Query gene ID	PtpAffx.209467.1.S1_at
Gene name	autoinhibited calcium ATPase
Organism	Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.84	97.1	PtpAffx.209467.1.S1_at	pmrna18776	autoinhibited calcium ATPase	-	6e-136	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	S.X.	H.G.	Please selecteFP Browser (expression)
0.42	68.6	PtpAffx.17728.1.S1_s_at	CV275037	hypothetical protein	-	4e-20	At1g74320	choline kinase, putative	S.X.	H.G.	Please selecteFP Browser (expression)
0.42	68.6	PtpAffx.127807.1.A1_at	CV243163	hypothetical protein	-	5e-4	At5g06100	MYB33 (MYB DOMAIN PROTEIN 33)	S.X.	H.G.	Please selecteFP Browser (expression)
0.40	67.0	PtpAffx.39084.1.S1_at	CK107282	hypothetical protein	-	3e-4	At1g10090	unknown protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.36	61.6	PtpAffx.140385.1.A1_at	CV259899	hypothetical protein	-	2e+0	At2g22426	unknown protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.33	57.5	PtpAffx.213460.1.S1_at	pmrna26316	hypothetical protein	-	1e-6	At2g37370	unknown protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.33	57.5	PtpAffx.209280.1.S1_x_at	pmrna18336	hypothetical protein	-	2e-17	At2g40116	phosphoinositide-specific phospholipase C family protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.30	52.0	PtpAffx.210222.1.S1_at	pmrna20133	hypothetical protein	-	1e-11	At4g27940	mitochondrial substrate carrier family protein	S.X.	H.G.	Please selecteFP Browser (expression)
0.17	29.1	PtpAffx.63690.1.S1_at	CV230923	hypothetical protein	-	7e-1	At5g61200	-	S.X.	H.G.	Please selecteFP Browser (expression)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
31.2	99.9	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
13.6	99.4	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
12.9	99.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
9.2	98.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
9.0	98.7	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM244441	Mixed infected tissue, biological rep3	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.0	88.0	GSM328063	Populus x canescens leaf control_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.6	84.5	GSM244436	Mmd infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.5	83.5	GSM244437	Mmd infected tissue, biological rep2	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.3	81.0	GSM244440	Mixed infected tissue, biological rep2	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.39	0	1394	PtpAffx.86362.1.S1_s_at	CV274254	autoinhibited calcium ATPase /// autoinhibited calcium ATPase	-	8e-86	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selecteFP Browser (expression)
0.39	0	1394	PtpAffx.86362.1.S1_at	CV274254	autoinhibited calcium ATPase	-	8e-86	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selecteFP Browser (expression)
0.23	0	763	PtpAffx.75172.1.A1_at	CV283423	autoinhibited calcium ATPase	-	4e-11	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	C.G.	S.X.	Please selecteFP Browser (expression)
0.35	5e-91	337	PtpAffx.206177.1.S1_at	pmrna12264	autoinhibited calcium ATPase	-	1e-52	At4g29900	ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)	C.G.	S.X.	Please selecteFP Browser (expression)
0.29	4e-73	278	Ptp.2372.1.S1_at	CK087471	autoinhibited calcium ATPase	-	3e-59	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selecteFP Browser (expression)
0.14	8e-53	210	PtpAffx.81470.1.S1_s_at	CV245113	autoinhibited calcium ATPase	-	1e-51	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selecteFP Browser (expression)
0.14	8e-53	210	PtpAffx.81470.1.S1_at	CV245113	autoinhibited calcium ATPase	-	1e-51	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selecteFP Browser (expression)
0.14	7e-50	200	PtpAffx.131512.1.S1_at	BU871504	autoinhibited calcium ATPase	-	1e+1	At5g36240	zinc knuckle (CCHC-type) family protein	C.G.	S.X.	Please selecteFP Browser (expression)
0.16	2e-47	192	PtpAffx.206178.1.S1_at	pmrna12265	autoinhibited calcium ATPase	-	2e-49	At4g29900	ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)	C.G.	S.X.	Please selecteFP Browser (expression)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.45	6e-136	486	Arabidopsis thaliana	At3g21180	821671	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.25	2e-102	375	Glycine max	Gma.3527.1.S1_at	AW733755	-	-	7e-69	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please select
0.24	1e-33	145	Hordeum vulgare	Contig6173_at	Contig6173	-	-	2e-36	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please select
0.26	1e-42	176	Oryza sativa	Os04g0605500	AK120057.1	-	Calcium-transporting ATPase 8, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8)	3e-30	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.19	5e-38	161	Triticum aestivum	Ta.4760.1.S1_x_at	CD936415	-	-	3e-32	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	C.G.	S.X.	Please select
0.17	3e-61	236	Vitis vinifera	1614028_at	CB976052	hypothetical protein LOC100259808	-	1e-55	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	C.G.	S.X.	Please select
0.15	7e-63	242	Zea mays	Zm.17277.1.S1_at	CF273093	-	-	1e-45	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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