Gene omics information

Query gene ID PtpAffx.209366.1.S1_at
Gene name white-brown-complex ABC transporter family
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.209366.1.S1_atpmrna18547white-brown-complex ABC transporter family-1e-18At2g39350ABC transporter family proteinS.X.H.G.
0.7393.6PtpAffx.202912.1.S1_atpmrna5768hypothetical protein-6e-4At5g25460unknown proteinS.X.H.G.
0.7393.6PtpAffx.204494.1.S1_atpmrna8820hypothetical protein-3e-69At4g35190unknown proteinS.X.H.G.
0.5582.2PtpAffx.210399.1.S1_atpmrna20438hypothetical protein-5e-18At1g73680pathogen-responsive alpha-dioxygenase, putativeS.X.H.G.
0.5582.2Ptp.6783.1.S1_atDN488831hypothetical protein-1e-5At5g62610basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.5078.6PtpAffx.125359.1.S1_atDN491593f-box family protein-1e-7At1g28310Dof-type zinc finger domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.199.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
20.199.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
17.399.6GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
5.797.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.992.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
2.088.0GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8602510PtpAffx.207670.1.S1_atpmrna15228white-brown-complex ABC transporter family-6e-18At2g39350ABC transporter family proteinC.G.S.X.
0.146e-963PtpAffx.133567.1.A1_atCV270752white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-4e-6At5g13580ABC transporter family proteinC.G.S.X.
0.014e-138PtpAffx.9265.4.A1_atCV242595hypothetical protein-6e-6At1g76410ATL8C.G.S.X.
0.014e-138PtpAffx.147166.1.A1_atCV264241hypothetical protein-1e-5At1g76410ATL8C.G.S.X.
0.011e+036PtpAffx.214478.1.S1_atpmrna28157hypothetical protein-7e-25At5g58040ATFIP1[V] (Arabidopsis homolog of yeast Fip1 [V])C.G.S.X.
0.011e+036PtpAffx.207988.1.S1_atpmrna15855hypothetical protein-4e-7At1g68790LINC3 (LITTLE NUCLEI3)C.G.S.X.
0.011e+036PtpAffx.207988.1.S1_s_atpmrna15855hypothetical protein-4e-7At1g68790LINC3 (LITTLE NUCLEI3)C.G.S.X.
0.011e+036PtpAffx.203757.1.S1_atpmrna7425hypothetical protein-9e+0At5g37910seven in absentia (SINA) family proteinC.G.S.X.
0.011e+036PtpAffx.202512.1.S1_atpmrna5028hypothetical protein-1e-74At2g43160epsin N-terminal homology (ENTH) domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.301e-1895Arabidopsis thalianaAt2g39350818520ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:plasma membrane;BOMAFPV---C.G.S.X.
0.021e+036Glycine maxHgAffx.20069.1.S1_atCA939111--9e-1At4g16500cysteine protease inhibitor family protein / cystatin family proteinC.G.S.X.
0.025e-136Hordeum vulgareContig23773_atContig23773--1e+0At5g14070ROXY2C.G.S.X.
0.022e-346Oryza sativaOs03g0281900AK072135.1-ABC transporter related domain containing protein3e-1At3g53510ABC transporter family proteinC.G.S.X.
0.024e+034Triticum aestivumTaAffx.70070.1.S1_atAJ610583--6e+0At5g12030AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)C.G.S.X.
0.013e-136Vitis vinifera1618000_atCD721411--2e-55At3g24180catalytic/ glucosylceramidaseC.G.S.X.
0.057e-342Zea maysZm.8175.1.A1_atBM382448--5e-6At2g39350ABC transporter family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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