Gene omics information

Query gene ID PtpAffx.209293.1.S1_s_at
Gene name fasciclin-like domain-containing protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6488.4PtpAffx.209293.1.S1_s_atpmrna18366fasciclin-like domain-containing protein-8e-4At3g55820-S.X.H.G.
0.5078.6PtpAffx.112917.2.A1_atCV271909ZIP transporter-4e-28At2g30080ZIP6S.X.H.G.
0.2747.1PtpAffx.159782.1.A1_atCV259240--5e+0At4g25590ADF7 (actin depolymerizing factor 7)S.X.H.G.
0.2645.2PtpAffx.158110.1.A1_s_atCV264939hypothetical protein-2e+0At3g51910AT-HSFA7AS.X.H.G.
0.2136.5Ptp.6631.1.S1_s_atCV243026thioredoxin h-5e-7At3g08710ATH9 (thioredoxin H-type 9)S.X.H.G.
0.2136.5PtpAffx.1567.1.A1_a_atCV243399hypothetical protein-5e-7At2g47210myb family transcription factorS.X.H.G.
0.1932.7PtpAffx.23817.1.S1_atCV264921hypothetical protein-6e-20At1g14650SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family proteinS.X.H.G.
0.1830.8PtpAffx.163033.1.S1_s_atCA923816hypothetical protein-8e-55At1g61150-S.X.H.G.
0.1729.1PtpAffx.87695.1.S1_atCV240625hypothetical protein-8e-15At1g26670VTI1BS.X.H.G.
0.1729.1PtpAffx.249.341.S1_atCN549778hypothetical protein-5e-19At2g24360serine/threonine/tyrosine kinase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.998.0GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
4.696.2GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.295.6GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
4.195.5GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
3.393.7GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.193.2GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.092.9GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.992.5GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.642e-60232PtpAffx.207744.1.S1_atpmrna15397fasciclin domain-containing protein-4e+0At5g44610MAP18 (Microtubule-associated Protein 18)C.G.S.X.
0.023e-136PtpAffx.16889.1.S1_atCV239404hypothetical protein-4e-2At4g01680MYB55 (myb domain protein 55)C.G.S.X.
0.034e+032PtpAffx.9948.2.S1_a_atBU893089hypothetical protein-7e-2At2g16770DNA binding / transcription factorC.G.S.X.
0.034e+032PtpAffx.4490.1.A1_s_atCV245676hypothetical protein-7e+0At5g64667IDL2 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 2)C.G.S.X.
0.014e+032PtpAffx.224850.1.S1_atpmrna43731hypothetical protein-3e-1At3g29763-C.G.S.X.
0.044e+032PtpAffx.212995.1.S1_atpmrna25410hypothetical protein-6e-1At1g22740RABG3BC.G.S.X.
0.014e+032PtpAffx.211631.1.S1_atpmrna22792hypothetical protein-4e+0At4g10457SCRL1 (SCR-Like 1)C.G.S.X.
0.014e+032PtpAffx.209578.1.S1_atpmrna18957hypothetical protein-1e-14At1g64570-C.G.S.X.
0.034e+032PtpAffx.207725.1.S1_atpmrna15350hypothetical protein-7e-6At5g02070protein kinase-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.108e-444Arabidopsis thalianaAt3g55820824748-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB---C.G.S.X.
0.044e+032Glycine maxGmaAffx.39817.1.S1_atBE330706--2e-1At1g67920unknown proteinC.G.S.X.
0.036e+030Hordeum vulgareContig17142_atContig17142--1e-3At2g19450TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)C.G.S.X.
0.046e+032Oryza sativaOsAffx.2587.1.S1_at---0C.G.S.X.
0.058e-134Triticum aestivumTa.17556.1.S1_atCA621791--7e+0At3g13550FUS9 (FUSCA 9)C.G.S.X.
0.059e-132Vitis vinifera1620272_atBQ797367hypothetical protein LOC100252883-2e+0At2g37330ALS3 (ALUMINUM SENSITIVE 3)C.G.S.X.
0.041e+032Zea maysZmAffx.370.1.A1_atAI673868--3e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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