Gene omics information

Query gene ID PtpAffx.209170.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.209170.1.S1_s_atpmrna18156hypothetical protein-4e-1At3g0556060S ribosomal protein L22-2 (RPL22B)S.X.H.G.
0.4471.9PtpAffx.126125.1.S1_s_atAI162512hypothetical protein-2e-12At1g29260PEX7S.X.H.G.
0.4268.6Ptp.1861.1.S1_x_atCN549959hypothetical protein-0At1g07930elongation factor 1-alpha / EF-1-alphaS.X.H.G.
0.3153.7PtpAffx.3788.3.S1_a_atBI139271hypothetical protein-3e+0At5g24410glucosamine/galactosamine-6-phosphate isomerase-relatedS.X.H.G.
0.2747.1PtpAffx.152437.4.S1_s_atBU824470hypothetical protein-4e-44At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)S.X.H.G.
0.1321.6PtpAffx.200043.1.S1_atpmrna74hypothetical protein-1e-89At3g58570DEAD box RNA helicase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.796.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
3.694.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.590.9GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.289.3GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.188.6GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.001e-115414PtpAffx.209170.1.S1_atpmrna18156hypothetical protein-4e-1At3g0556060S ribosomal protein L22-2 (RPL22B)C.G.S.X.
0.181e-66252PtpAffx.144479.1.S1_atDN494126hypothetical protein-3e-18At3g18630uracil DNA glycosylase family proteinC.G.S.X.
0.039e-340PtpAffx.207192.1.S1_atpmrna14267hypothetical protein-2e-4At5g08310pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.035e-134PtpAffx.3476.1.A1_atCV258320hypothetical protein-5e-1At1g63530-C.G.S.X.
0.065e-134PtpAffx.201455.1.S1_atpmrna2867--3e+0At5g29231unknown proteinC.G.S.X.
0.055e-134Ptp.3335.1.S1_s_atBU815946--9e-1At5g27690heavy-metal-associated domain-containing proteinC.G.S.X.
0.032e+032PtpAffx.6537.1.A1_atCV232794hypothetical protein-1e-1At3g05500rubber elongation factor (REF) family proteinC.G.S.X.
0.022e+032PtpAffx.3906.2.S1_atCV242688hypothetical protein-9e-22At1g75080BZR1 (BRASSINAZOLE-RESISTANT 1)C.G.S.X.
0.032e+032PtpAffx.2864.1.S1_atCV275653hypothetical protein-3e-58At1g04760ATVAMP726C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-134Arabidopsis thalianaAt3g0556081972260S ribosomal protein L22-2 (RPL22B)F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, nucleolus, plasma membrane;MFOP---C.G.S.X.
0.065e-134Glycine maxGmaAffx.70962.2.S1_atAW100248--4e-12At5g67420LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37)C.G.S.X.
0.045e-236Hordeum vulgareContig26151_atContig26151--1e+0At1g49990-C.G.S.X.
0.031e-240Oryza sativaOs.56923.1.S1_at---0C.G.S.X.
0.072e+032Triticum aestivumTaAffx.78881.1.S1_atCA725309--2e-1At4g00270DNA-binding storekeeper protein-relatedC.G.S.X.
0.067e-338Vitis vinifera1610436_atCB340029--6e-17At1g62990KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7)C.G.S.X.
0.042e-134Zea maysZm.15339.1.A1_atBM339205--4e+0At3g02840immediate-early fungal elicitor family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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