Gene omics information

Query gene ID PtpAffx.209149.1.S1_x_at
Gene name pho1-like protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.209149.1.S1_x_atpmrna18114pho1-like protein-3e-16At2g03240-S.X.H.G.
0.0812.9PtpAffx.115227.1.A1_atCV255521hypothetical protein-2e+0At2g20920unknown proteinS.X.H.G.
0.035.2PtpAffx.209371.1.S1_atpmrna18554hypothetical protein-4e+0At2g22670IAA8S.X.H.G.
0.023.6PtpAffx.32845.1.S1_atCK097658hypothetical protein-5e-61At2g2014026S protease regulatory complex subunit 4, putativeS.X.H.G.
0.012.2PtpAffx.18830.1.S1_atCV239939--8e-3At4g31340myosin heavy chain-relatedS.X.H.G.
0.012.2PtpAffx.43868.1.S1_atCV282588silencing group A protein-4e-45At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.998.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
7.198.1GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
6.097.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
4.596.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.894.9GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.193.2GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
2.389.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
2.289.3GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9502587PtpAffx.209145.1.S1_s_atpmrna18109predicted small molecule transporter /// pho1-like protein /// pho1-like protein-5e-15At1g14040-C.G.S.X.
0.7701431PtpAffx.218576.1.S1_s_atpmrna34238pho1-like protein-3e-16At2g03240-C.G.S.X.
0.9201431PtpAffx.209153.1.S1_x_atpmrna18121pho1-like protein /// pho1-like protein-2e-18At2g03240-C.G.S.X.
0.860928PtpAffx.207872.1.S1_atpmrna15627pho1-like protein-9e-17At1g14040-C.G.S.X.
0.253e-1791PtpAffx.213229.1.S1_atpmrna25876pho1-like protein-9e-17At1g26730EXS family protein / ERD1/XPR1/SYG1 family proteinC.G.S.X.
0.243e-1791PtpAffx.206045.1.S1_atpmrna11981predicted small molecule transporter-7e-12At2g03250EXS family protein / ERD1/XPR1/SYG1 family proteinC.G.S.X.
0.125e-1687PtpAffx.207871.1.S1_atpmrna15626--7e-27At1g69480EXS family protein / ERD1/XPR1/SYG1 family proteinC.G.S.X.
0.062e-1275PtpAffx.222655.1.S1_s_atpmrna40202pho1-like protein /// predicted small molecule transporter-1e-13At3g29060-C.G.S.X.
0.182e-1275PtpAffx.213954.1.S1_atpmrna27198pho1-like protein-3e-13At2g03260EXS family protein / ERD1/XPR1/SYG1 family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.223e-1687Arabidopsis thalianaAt2g03240814853-F:unknown;P:unknown;C:integral to membrane;MFPO---C.G.S.X.
0.047e-1273Glycine maxGmaAffx.77909.1.S1_atBG882051--9e-11At1g26730EXS family protein / ERD1/XPR1/SYG1 family proteinC.G.S.X.
0.012e+034Hordeum vulgareHT07L18u_atHT07L18u--2e+1Atcg00140-C.G.S.X.
0.032e-656Oryza sativaOs02g0809800AK063181.1--5e-1At2g34140Dof-type zinc finger domain-containing proteinC.G.S.X.
0.011e+036Triticum aestivumTaAffx.85101.1.S1_atCA625583--4e+0At3g13520AGP12 (ARABINOGALACTAN PROTEIN 12)C.G.S.X.
0.013e-136Vitis vinifera1611670_atBQ797758hypothetical protein LOC100241885-9e-70At5g54750transport protein particle (TRAPP) component Bet3, putativeC.G.S.X.
0.012e+034Zea maysZm.5710.1.S1_atCF014718charged multivesicular body protein 2b-2e-10At1g03950VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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