Gene omics information

Query gene ID PtpAffx.209039.1.S1_at
Gene name
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5683.9PtpAffx.209039.1.S1_atpmrna17895--4e-5At3g16910AAE7 (ACYL-ACTIVATING ENZYME 7)S.X.H.G.
0.2441.8PtpAffx.50019.1.A1_atCV262087hypothetical protein-6e+0At3g20900unknown proteinS.X.H.G.
0.2441.8PtpAffx.222784.1.S1_atpmrna40435hypothetical protein-1e-26At5g27540MIRO1 (Miro-related GTP-ase 1)S.X.H.G.
0.1830.8PtpAffx.203253.1.S1_atpmrna6438hypothetical protein-2e-1At5g26070hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.1016.3PtpAffx.149986.1.S1_atDN501685--1e+0At5g50915basic helix-loop-helix (bHLH) family proteinS.X.H.G.
0.0711.6PtpAffx.204257.1.S1_atpmrna8379hypothetical protein-3e+0At4g24940SAE1A (SUMO-ACTIVATING ENZYME 1A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.398.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
8.098.4GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
7.198.1GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.296.8GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.996.5GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.395.8GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
4.295.6GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.295.6GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.694.5GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.292e-50200PtpAffx.12923.1.S1_a_atCV271339hypothetical protein-3e+0At3g16910AAE7 (ACYL-ACTIVATING ENZYME 7)C.G.S.X.
0.025e-550PtpAffx.205872.1.S1_atpmrna11640hypothetical protein-2e-7At1g20560AAE1 (ACYL ACTIVATING ENZYME 1)C.G.S.X.
0.025e-550PtpAffx.205872.1.S1_x_atpmrna11640hypothetical protein-2e-7At1g20560AAE1 (ACYL ACTIVATING ENZYME 1)C.G.S.X.
0.025e-550PtpAffx.201552.1.S1_x_atpmrna3052hypothetical protein-2e-7At2g17650AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.025e-550PtpAffx.201552.1.S1_atpmrna3052hypothetical protein-2e-7At2g17650AMP-dependent synthetase and ligase family proteinC.G.S.X.
0.031e-242PtpAffx.146250.1.S1_atCX169298hypothetical protein-4e-56At3g05970LACS6 (long-chain acyl-CoA synthetase 6)C.G.S.X.
0.022e-138PtpAffx.111739.1.S1_atCK095838--3e-1At1g67600-C.G.S.X.
0.028e-136PtpAffx.74457.1.S1_s_atCB239510hypothetical protein-3e-16At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)C.G.S.X.
0.028e-136PtpAffx.74457.1.S1_atCB239510hypothetical protein-3e-16At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.094e-550Arabidopsis thalianaAt3g16910820946AAE7 (ACYL-ACTIVATING ENZYME 7)Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.---C.G.S.X.
0.262e-20101Glycine maxGma.8552.1.S1_atBI968021--7e-17At3g16910AAE7 (ACYL-ACTIVATING ENZYME 7)C.G.S.X.
0.138e-1167Hordeum vulgareContig5527_atContig5527--2e-4At3g16910AAE7 (ACYL-ACTIVATING ENZYME 7)C.G.S.X.
0.063e-757Oryza sativaOs03g0305100AK101765.1-Adenosine monophosphate binding protein 1 AMPBP17e-5At3g16910AAE7 (ACYL-ACTIVATING ENZYME 7)C.G.S.X.
0.091e-1171Triticum aestivumTaAffx.31783.1.S1_atCD921514--2e-2At1g77240AMP-binding protein, putativeC.G.S.X.
0.262e-1995Vitis vinifera1615217_atCB978480hypothetical protein LOC100267152-3e-6At3g16910AAE7 (ACYL-ACTIVATING ENZYME 7)C.G.S.X.
0.063e-1375Zea maysZm.1579.1.S1_atAY107917.1AMP-binding protein-3e-7At1g77240AMP-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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