Gene omics information

Query gene ID PtpAffx.208921.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4268.6PtpAffx.208921.1.S1_atpmrna17689hypothetical protein-7e-2At3g06390integral membrane family proteinS.X.H.G.
0.3357.5PtpAffx.211622.1.S1_atpmrna22777--9e-6At1g35580CINV1 (cytosolic invertase 1)S.X.H.G.
0.3153.7PtpAffx.217704.1.S1_atpmrna33068hypothetical protein-3e-86Atcg01280-S.X.H.G.
0.2238.3PtpAffx.223761.1.S1_s_atpmrna41923hypothetical protein-2e-1At4g19110protein kinase, putativeS.X.H.G.
0.046.9PtpAffx.222555.1.S1_atpmrna40070hypothetical protein-2e+0At1g54740-S.X.H.G.
0.046.9PtpAffx.30879.1.A1_atCV258015hypothetical protein-4e-2At1g68070zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.399.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
6.797.9GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.894.9GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.092.9GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.892.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
2.691.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136PtpAffx.76067.1.A1_atCV245237--3e-3At3g53630unknown proteinC.G.S.X.
0.034e-136PtpAffx.32868.1.A1_atCK096880hypothetical protein-2e-9At1g32120unknown proteinC.G.S.X.
0.024e-136PtpAffx.206041.1.S1_atpmrna11973--4e-1At4g14640CAM8 (CALMODULIN 8)C.G.S.X.
0.024e-136Ptp.3549.1.S1_atDN493225hypothetical protein-2e-3At2g18630unknown proteinC.G.S.X.
0.022e+034PtpAffx.679.1.S1_s_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QC.G.S.X.
0.032e+034PtpAffx.679.2.S1_atCX171075peroxiredoxin-2e-14At3g26060ATPRX QC.G.S.X.
0.022e+034PtpAffx.679.1.S1_atCV276694peroxiredoxin-5e-41At3g26060ATPRX QC.G.S.X.
0.032e+034PtpAffx.679.3.S1_atCV244474peroxiredoxin-3e-29At3g26060ATPRX QC.G.S.X.
0.042e+034PtpAffx.224806.1.S1_atpmrna43667--2e-1At4g25150acid phosphatase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.047e-238Arabidopsis thalianaAt3g06390819813integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.034e-136Glycine maxGma.10365.1.S1_atBG725377--5e-3At4g12720NUDT7C.G.S.X.
0.032e+032Hordeum vulgareHT02B15r_atHT02B15r--2e-2At1g05040unknown proteinC.G.S.X.
0.031e-138Oryza sativaOs01g0611300AK061273.1-Hypothetical protein6e-1At2g46620AAA-type ATPase family proteinC.G.S.X.
0.048e-238Triticum aestivumTaAffx.77699.1.S1_atCA743957--1e+1Atmg01310-C.G.S.X.
0.033e-134Vitis vinifera1611889_atCF201915.1--2e-24At3g07680emp24/gp25L/p24 family proteinC.G.S.X.
0.022e+032Zea maysZm.18230.1.S1_atCN844227hypothetical protein LOC100278474-2e+0At4g18510CLE2 (CLAVATA3/ESR-RELATED)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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