Gene omics information

Query gene ID PtpAffx.208807.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.208807.1.S1_atpmrna17463hypothetical protein-9e-103At1g26850dehydration-responsive family proteinS.X.H.G.
0.6388.1PtpAffx.208807.1.S1_x_atpmrna17463hypothetical protein-9e-103At1g26850dehydration-responsive family proteinS.X.H.G.
0.2136.5PtpAffx.374.8.S1_a_atCV226731hypothetical protein-6e-18At4g01710CRK (CROOKED)S.X.H.G.
0.2034.6PtpAffx.35695.1.A1_atCF228826hypothetical protein-3e-1At3g44935unknown proteinS.X.H.G.
0.1118.1Ptp.2828.1.A1_atCV243012hypothetical protein-9e-92At5g01020protein kinase family proteinS.X.H.G.
0.069.8Ptp.4906.1.S1_atBU809150SIN3 component, histone deacetylase complex /// SIN3 component, histone deacetylase complex-3e+0At5g19430zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.058.3PtpAffx.6289.2.A1_atCV282867hypothetical protein-9e-12At1g74440unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.899.5GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
4.896.4GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
4.195.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
2.088.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0003747PtpAffx.208807.1.S1_x_atpmrna17463hypothetical protein-9e-103At1g26850dehydration-responsive family proteinC.G.S.X.
0.8502339PtpAffx.208132.1.S1_x_atpmrna16160hypothetical protein-3e-103At1g26850dehydration-responsive family proteinC.G.S.X.
0.8502339PtpAffx.208132.1.S1_s_atpmrna16160hypothetical protein-3e-103At1g26850dehydration-responsive family proteinC.G.S.X.
0.5701409PtpAffx.3868.1.A1_s_atBI073061hypothetical protein-5e-93At1g26850dehydration-responsive family proteinC.G.S.X.
0.411e-105385PtpAffx.210508.1.S1_s_atpmrna20612hypothetical protein-1e-28At1g26850dehydration-responsive family proteinC.G.S.X.
0.226e-80299PtpAffx.162879.1.S1_s_atCA823031hypothetical protein-1e-6At1g26850dehydration-responsive family proteinC.G.S.X.
0.162e-45184Ptp.532.1.S1_atCK088410hypothetical protein-1e-4At1g26850dehydration-responsive family proteinC.G.S.X.
0.106e-43176PtpAffx.137030.1.S1_s_atBU882587hypothetical protein-3e-27At1g26850dehydration-responsive family proteinC.G.S.X.
0.273e-38161PtpAffx.220031.1.S1_atpmrna36286hypothetical protein-6e-27At4g18030dehydration-responsive family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.489e-103375Arabidopsis thalianaAt1g26850839229dehydration-responsive family proteinF:unknown;P:unknown;C:Golgi apparatus, membrane;PBO---C.G.S.X.
0.551e-87325Glycine maxGma.4277.2.S1_a_atCA785837--2e-51At1g26850dehydration-responsive family proteinC.G.S.X.
0.129e-1581Hordeum vulgareContig10400_s_atContig10400--4e-5At1g26850dehydration-responsive family proteinC.G.S.X.
0.258e-40167Oryza sativaOs.23266.1.S1_at---0C.G.S.X.
0.231e-61238Triticum aestivumTa.3322.1.S1_s_atCK208679--4e-50At1g26850dehydration-responsive family proteinC.G.S.X.
0.539e-94343Vitis vinifera1612756_atCF207475hypothetical protein LOC100258541-1e-45At1g26850dehydration-responsive family proteinC.G.S.X.
0.064e-446Zea maysZm.3522.1.S1_atBG265505--1e-19At4g00740dehydration-responsive protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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