Gene omics information

Query gene ID PtpAffx.208770.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.208770.1.S1_s_atpmrna17383hypothetical protein-6e-1At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.5380.5PtpAffx.211768.1.S1_atpmrna23079hypothetical protein-8e-31At2g47810NF-YB5 (NUCLEAR FACTOR Y, SUBUNIT B5)S.X.H.G.
0.1830.8PtpAffx.79840.1.S1_atCK090827hypothetical protein-4e-1At1g75550glycine-rich proteinS.X.H.G.
0.1525.3PtpAffx.140394.1.A1_atCV260566--1e+0At1g49220zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.0812.9PtpAffx.203995.1.S1_atpmrna7882hypothetical protein-4e-25At3g02850SKORS.X.H.G.
0.046.9PtpAffx.36261.2.S1_atCX183660hypothetical protein-3e-2At1g60800NIK3 (NSP-INTERACTING KINASE 3)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.999.4GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
10.999.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
9.598.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
8.998.7GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
7.898.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
7.898.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
7.098.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.691.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.490.4GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.886.4GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.701e-132472PtpAffx.221799.1.S1_atpmrna38855hypothetical protein-1e+0At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.261e-240PtpAffx.30567.1.A1_atCV261850hypothetical protein-1e-1At5g41071unknown proteinC.G.S.X.
0.072e-136PtpAffx.201722.1.S1_atpmrna3422hypothetical protein-2e+0At3g45170zinc finger (GATA type) family proteinC.G.S.X.
0.038e-134PtpAffx.207690.1.S1_atpmrna15264hypothetical protein-2e+0At5g06020self-incompatibility protein-relatedC.G.S.X.
0.038e-134PtpAffx.132718.1.S1_atCX656395hypothetical protein-1e-1At2g45860unknown proteinC.G.S.X.
0.038e-134PtpAffx.132718.1.S1_s_atCX656395hypothetical protein-1e-1At2g45860unknown proteinC.G.S.X.
0.033e+032PtpAffx.21819.1.S1_atCV245242hypothetical protein-2e+0At4g19740catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.033e+032PtpAffx.209278.1.S1_atpmrna18333hypothetical protein-2e-31At3g55950CCR3 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 3)C.G.S.X.
0.043e+032PtpAffx.204763.1.S1_atpmrna9379hypothetical protein-2e-14At2g22750basic helix-loop-helix (bHLH) family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-134Arabidopsis thalianaAt4g14815827138protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;P---C.G.S.X.
0.311e-1583Glycine maxGma.7422.1.S1_atBQ612005--2e+0At5g63087-C.G.S.X.
0.034e+030Hordeum vulgareEBro08_SQ011_H01_atEBro08_SQ011_H01--5e+0At5g18970AWPM-19-like membrane family proteinC.G.S.X.
0.025e+032Oryza sativaOs07g0224900AK111745.1-WD40-like domain containing protein1e+0At2g47990SWA1 (SLOW WALKER1)C.G.S.X.
0.056e-134Triticum aestivumTa.21840.1.S1_atCA704487--6e-2At2g2521060S ribosomal protein L39 (RPL39A)C.G.S.X.
0.047e-132Vitis vinifera1617929_atCF403754hypothetical protein LOC100254761-3e-1At4g32870unknown proteinC.G.S.X.
0.074e+030Zea maysZmAffx.1194.1.A1_atBE025369--4e+0At5g59990-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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