Gene omics information

Query gene ID PtpAffx.208719.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7192.6PtpAffx.208719.1.S1_atpmrna17289hypothetical protein-9e-9At1g066202-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.1321.6PtpAffx.24245.1.A1_atCV267867--5e-1At3g215001-deoxy-D-xylulose-5-phosphate synthaseS.X.H.G.
0.1118.1PtpAffx.148122.1.S1_atCX176412hypothetical protein-6e-3At1g066402-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.035.2PtpAffx.52716.3.A1_atCV259272hypothetical protein-4e+0At2g20605-S.X.H.G.
0.023.6Ptp.5049.2.S1_s_atBU888047hypothetical protein-5e+0At5g59305unknown proteinS.X.H.G.
0.023.6PtpAffx.18585.1.A1_atCV241884--2e+0At4g05230ubiquitin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.799.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
15.999.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
9.598.8GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
9.498.8GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.596.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.596.1GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.691.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
1.785.5GSM372045Clone1979_LPI5_N+_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.670803PtpAffx.148122.1.S1_atCX176412hypothetical protein-6e-3At1g066402-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.311e-122440PtpAffx.135709.1.S1_atAJ779763hypothetical protein-1e-2At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.311e-122440PtpAffx.135709.1.S1_s_atAJ779763hypothetical protein-1e-2At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.335e-1169PtpAffx.208720.1.S1_atpmrna17290hypothetical protein-1e-1At5g434402-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.103e-654PtpAffx.61514.1.A1_atBP930580hypothetical protein-8e-2At3g614002-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.083e-654PtpAffx.211009.1.S1_atpmrna21633hypothetical protein-3e-2At3g614002-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.141e-552PtpAffx.145291.1.A1_atBP933798hypothetical protein-4e+0At3g22260OTU-like cysteine protease family proteinC.G.S.X.
0.055e-550PtpAffx.203996.1.S1_atpmrna7884hypothetical protein-4e-2At1g50960GA2OX7 (GIBBERELLIN 2-OXIDASE 7)C.G.S.X.
0.132e-448PtpAffx.208718.1.S1_atpmrna17288hypothetical protein-3e-2At3g614002-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.119e-961Arabidopsis thalianaAt1g066208371712-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase---C.G.S.X.
0.184e-21103Glycine maxGmaAffx.55339.1.S1_atBM178203--5e-2At5g434502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.023e-136Hordeum vulgareContig20770_atContig20770--6e+0At5g56600PRF3 (PROFILIN 3)C.G.S.X.
0.024e+034Oryza sativaOs07g05404329635.m03520--5e+0At5g44560VPS2.2C.G.S.X.
0.029e+032Triticum aestivumTa.6298.1.S1_atBJ301596--3e+0At5g19940plastid-lipid associated protein PAP-related / fibrillin-relatedC.G.S.X.
0.081e-1789Vitis vinifera1618459_atCD799037hypothetical protein LOC100266526-2e-2At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.024e+032Zea maysZmAffx.962.1.S1_atAI833777--3e-22At1g64680unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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