Gene omics information

Query gene ID PtpAffx.208527.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.208527.1.S1_atpmrna16920hypothetical protein-2e-44At3g06290-S.X.H.G.
0.0711.6PtpAffx.97306.1.S1_atCX185991hypothetical protein-1e-11At5g62090-S.X.H.G.
0.069.8PtpAffx.67827.1.S1_atCV260562hypothetical protein-1e-4At5g46840RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.058.3PtpAffx.80257.1.S1_atDN494706hypothetical protein-8e-2At5g52500unknown proteinS.X.H.G.
0.046.9PtpAffx.158765.1.S1_a_atCN519725hypothetical protein-2e-6At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinS.X.H.G.
0.035.2Ptp.1519.1.S1_atBU898007hypothetical protein-2e-8At1g53530signal peptidase I family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.498.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
6.497.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.495.9GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
4.095.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.092.9GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.992.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-134PtpAffx.32449.1.A1_atCV232058hypothetical protein-1e-29At1g21080DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.039e-134PtpAffx.32449.1.A1_a_atCV232058hypothetical protein-1e-29At1g21080DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.039e-134PtpAffx.220826.1.S1_atpmrna37272hypothetical protein-2e+0At5g52260AtMYB19 (myb domain protein 19)C.G.S.X.
0.039e-134PtpAffx.218040.1.S1_atpmrna33552hypothetical protein-7e+0At5g41440zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.049e-134PtpAffx.202209.1.S1_atpmrna4427hypothetical protein-1e+0At1g65484unknown proteinC.G.S.X.
0.039e-134PtpAffx.12036.4.A1_a_atCV242879hypothetical protein-8e-40At3g62370unknown proteinC.G.S.X.
0.054e+032PtpAffx.223736.1.S1_s_atpmrna41890cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein-2e+0At5g39580peroxidase, putativeC.G.S.X.
0.044e+032PtpAffx.218194.1.S1_s_atpmrna33742cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// cytochrome P450 /// hypothetical protein-4e+0At5g39580peroxidase, putativeC.G.S.X.
0.034e+032PtpAffx.201971.1.S1_atpmrna3940hypothetical protein-1e-7At1g58280-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-44178Arabidopsis thalianaAt3g06290819803-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB---C.G.S.X.
0.059e-134Glycine maxGmaAffx.58086.1.S1_atBE330355--4e+0At5g58005unknown proteinC.G.S.X.
0.045e+030Hordeum vulgareContig13749_atContig13749--1e+0At1g64295F-box family protein-relatedC.G.S.X.
0.093e-23109Oryza sativaOs07g0646000AK059345.1--7e-41At3g06290-C.G.S.X.
0.044e-238Triticum aestivumTa.10198.2.A1_atBJ253130--1e-18At3g03250UGP (UDP-glucose pyrophosphorylase)C.G.S.X.
0.052e-134Vitis vinifera1622600_atBQ792784hypothetical protein LOC100264066-5e-2At4g20990ACA4 (ALPHA CARBONIC ANHYDRASE 4)C.G.S.X.
0.044e+030Zea maysZm.9998.1.A1_atBM335619--3e-1At5g57010calmodulin-binding family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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