Gene omics information

Query gene ID PtpAffx.208173.1.S1_at
Gene name autoinhibited calcium ATPase
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7393.6PtpAffx.208173.1.S1_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)S.X.H.G.
0.9199.2PtpAffx.208173.1.S1_x_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)S.X.H.G.
0.6791.1PtpAffx.224180.1.S1_atpmrna42478hypothetical protein-1e-4At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedS.X.H.G.
0.3863.7PtpAffx.214387.1.S1_atpmrna27998hypothetical protein-7e-1At4g16510YbaK/prolyl-tRNA synthetase-relatedS.X.H.G.
0.3153.7PtpAffx.208983.1.S1_s_atpmrna17803hypothetical protein-3e-2At1g68765IDA (INFLORESCENCE DEFICIENT IN ABSCISSION)S.X.H.G.
0.2543.6PtpAffx.161922.1.A1_s_atCK094074autoinhibited calcium ATPase /// autoinhibited calcium ATPase-3e+0At4g17453unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
16.599.6GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
14.499.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
12.499.3GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
10.199.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
10.098.9GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.092.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.092.9GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.791.8GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0005769PtpAffx.208173.1.S1_x_atpmrna16258autoinhibited calcium ATPase-7e-55At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.9003687PtpAffx.208747.1.S1_x_atpmrna17342autoinhibited calcium ATPase-3e-45At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.9003687PtpAffx.208747.1.S1_atpmrna17342autoinhibited calcium ATPase-3e-45At3g22910calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)C.G.S.X.
0.168e-105383PtpAffx.161922.1.A1_s_atCK094074autoinhibited calcium ATPase /// autoinhibited calcium ATPase-3e+0At4g17453unknown proteinC.G.S.X.
0.261e-84315PtpAffx.201699.1.S1_atpmrna3388autoinhibited calcium ATPase-2e-89At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.261e-84315PtpAffx.201699.1.S1_x_atpmrna3388autoinhibited calcium ATPase-2e-89At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.355e-78293PtpAffx.205722.1.S1_atpmrna11294autoinhibited calcium ATPase-4e-81At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.183e-33145Ptp.7148.1.S1_atDN488127--1e-7At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.076e-1377PtpAffx.86362.1.S1_s_atCV274254autoinhibited calcium ATPase /// autoinhibited calcium ATPase-8e-86At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.287e-55216Arabidopsis thalianaAt3g22910821863calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13)F:calmodulin binding, calcium-transporting ATPase activity;P:cation transport, calcium ion transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV---C.G.S.X.
0.046e-757Glycine maxGma.3527.1.S1_atAW733755--7e-69At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.085e-859Hordeum vulgareContig25293_atContig25293--5e-52At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.063e-656Oryza sativaOs04g0605500AK120057.1-Calcium-transporting ATPase 8, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8)3e-30At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)C.G.S.X.
0.057e-963Triticum aestivumTa.9178.1.S1_atCD452861--7e-17At4g29900ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10)C.G.S.X.
0.293e-125448Vitis vinifera1616662_atCF404703hypothetical protein LOC100254645-2e-34At3g63380calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)C.G.S.X.
0.061e-552Zea maysZm.17277.1.S1_atCF273093--1e-45At5g57110ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage