Gene omics information

Query gene ID PtpAffx.207941.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8196.1PtpAffx.207941.1.S1_atpmrna15760hypothetical protein-5e-1At3g17060pectinesterase family proteinS.X.H.G.
0.8096.0PtpAffx.224620.1.S1_atpmrna43330hypothetical protein-2e-1At2g43860polygalacturonase, putative / pectinase, putativeS.X.H.G.
0.8096.0PtpAffx.206504.1.S1_atpmrna12903hypothetical protein-7e-5At5g58170SVL5 (SHV3-LIKE 5)S.X.H.G.
0.7794.9PtpAffx.224620.1.S1_s_atpmrna43330hypothetical protein-2e-1At2g43860polygalacturonase, putative / pectinase, putativeS.X.H.G.
0.7393.6PtpAffx.200884.1.S1_atpmrna1732hypothetical protein-1e+0At1g6743060S ribosomal protein L17 (RPL17B)S.X.H.G.
0.7393.6PtpAffx.224255.1.S1_s_atpmrna42645hypothetical protein-5e-1At2g15450glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinS.X.H.G.
0.7393.6PtpAffx.206633.1.S1_atpmrna13167hypothetical protein-2e-10At3g43860AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4)S.X.H.G.
0.6991.5PtpAffx.215732.1.S1_atpmrna30090hypothetical protein-2e-7At3g01270pectate lyase family proteinS.X.H.G.
0.6588.6PtpAffx.210223.1.S1_atpmrna20134hypothetical protein-9e-2At2g34850MEE25 (maternal effect embryo arrest 25)S.X.H.G.
0.6187.0PtpAffx.101641.1.A1_atCV258037hypothetical protein-6e-19At3g22510unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.399.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
23.699.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
17.199.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
10.899.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
8.898.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
7.498.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
0.033.6GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.033.6GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
0.033.6GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
0.033.6GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-240PtpAffx.208468.1.S1_atpmrna16820hypothetical protein-6e-5At4g15980pectinesterase family proteinC.G.S.X.
0.036e-136PtpAffx.210609.1.S1_atpmrna20809hypothetical protein-3e-2At4g24750-C.G.S.X.
0.016e-136PtpAffx.206730.1.S1_atpmrna13358hypothetical protein-3e-5At5g11530EMF1 (embryonic flower 1)C.G.S.X.
0.016e-136PtpAffx.206730.1.S1_s_atpmrna13358hypothetical protein-3e-5At5g11530EMF1 (embryonic flower 1)C.G.S.X.
0.023e+034PtpAffx.33375.3.S1_a_atCK090687hypothetical protein-7e-12At1g75980-C.G.S.X.
0.023e+034PtpAffx.224464.1.S1_atpmrna43023hypothetical protein-7e-3At5g08770unknown proteinC.G.S.X.
0.023e+034PtpAffx.20937.1.A1_atCV257366--4e-1At3g46010ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)C.G.S.X.
0.013e+034PtpAffx.205076.1.S1_atpmrna10060hypothetical protein-3e-47At1g08130ATLIG1 (ARABIDOPSIS THALIANA DNA LIGASE 1)C.G.S.X.
0.023e+034PtpAffx.114839.1.A1_atCV242206--2e+0At4g26950unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.145e-136Arabidopsis thalianaAt3g17060820963pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM---C.G.S.X.
0.076e-136Glycine maxGmaAffx.33118.1.S1_atBQ610971--8e-1At2g20805-C.G.S.X.
0.024e+032Hordeum vulgareHS04E01u_s_atHS04E01u--1e+0At1g17970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.039e-136Oryza sativaOs01g0229000AJ495800.1-Hypothetical protein6e+0At5g05040-C.G.S.X.
0.032e+034Triticum aestivumTaAffx.50191.1.S1_atCA744699--8e-1At5g41765unknown proteinC.G.S.X.
0.022e+032Vitis vinifera1614998_atCD009588--1e+0At4g24230ACBP3 (ACYL-COA-BINDING DOMAIN 3)C.G.S.X.
0.033e+032Zea maysZm.17489.1.A1_atCK369860sulfated surface glycoprotein 185-3e-1At1g75550glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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