Gene omics information

Query gene ID PtpAffx.207242.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6388.1PtpAffx.207242.1.S1_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinS.X.H.G.
0.5582.2PtpAffx.31782.2.A1_a_atCV272415gtp-binding protein SAR1-4e-47At1g09180ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)S.X.H.G.
0.4673.7PtpAffx.132883.1.S1_atBI072375hypothetical protein-2e-1At4g10430-S.X.H.G.
0.4471.9PtpAffx.218771.1.S1_s_atpmrna34498jumonji domain protein /// hypothetical protein-5e-26At1g30810transcription factorS.X.H.G.
0.4067.0PtpAffx.207242.1.S1_s_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinS.X.H.G.
0.3661.6PtpAffx.205481.1.S1_x_atpmrna10842hypothetical protein-5e-1At5g17450heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.399.4GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
11.299.1GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
10.599.0GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
10.199.0GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
5.997.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.088.0GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
1.886.4GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
1.684.5GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
1.381.0GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9802504PtpAffx.207242.1.S1_s_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinC.G.S.X.
0.8901697PtpAffx.205285.1.S1_atpmrna10476hypothetical protein-3e-19At4g35470leucine-rich repeat family proteinC.G.S.X.
0.205e-126452PtpAffx.31091.1.S1_atCV248332--1e+0At2g39790mitochondrial glycoprotein family protein / MAM33 family proteinC.G.S.X.
0.033e-448PtpAffx.90384.1.S1_atCK108669--5e-1At4g16610zinc finger (C2H2 type) family proteinC.G.S.X.
0.013e-138PtpAffx.210214.1.S1_atpmrna20113hypothetical protein-2e-24At5g65770LINC4 (LITTLE NUCLEI4)C.G.S.X.
0.011e+036PtpAffx.207293.1.S1_atpmrna14465cc-nbs-lrr resistance protein-4e-1At2g23110-C.G.S.X.
0.011e+036PtpAffx.204367.1.S1_atpmrna8582hypothetical protein-1e-15At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeC.G.S.X.
0.011e+036PtpAffx.204367.1.S1_s_atpmrna8582hypothetical protein-1e-15At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeC.G.S.X.
0.011e+036Ptp.3066.1.S1_s_atBU869804hypothetical protein-2e-13At4g38220aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.262e-20101Arabidopsis thalianaAt4g35470829699leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:plasma membrane;MPBOFAV---C.G.S.X.
0.352e-39165Glycine maxGmaAffx.46385.2.S1_atCA801989--4e-28At4g35470leucine-rich repeat family proteinC.G.S.X.
0.047e-652Hordeum vulgareContig11084_atContig11084--2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.054e-138Oryza sativaOs08g0511700AK065422.1-Leucine-rich repeat, typical subtype containingprotein2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.022e-138Triticum aestivumTa.19238.1.S1_atCA649145--4e+0At3g44950glycine-rich proteinC.G.S.X.
0.021e-240Vitis vinifera1622003_atCF415247hypothetical protein LOC100251511-3e-1At3g15357unknown proteinC.G.S.X.
0.025e+032Zea maysZm.428.1.S1_atAF077372.1hypothetical protein LOC100191335-8e-16At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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