Gene omics information

Query gene ID PtpAffx.206953.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3661.6PtpAffx.206953.1.S1_atpmrna13785hypothetical protein-3e-13At1g15380lactoylglutathione lyase family protein / glyoxalase I family proteinS.X.H.G.
0.5582.2PtpAffx.223255.1.S1_atpmrna41158hypothetical protein-4e+0At5g62165AGL42 (AGAMOUS LIKE 42)S.X.H.G.
0.2645.2PtpAffx.220463.1.S1_atpmrna36856--2e-2At1g60780HAP13 (HAPLESS 13)S.X.H.G.
0.2238.3PtpAffx.221757.1.S1_atpmrna38801hypothetical protein-3e-1At1g36732CPuORF19 (Conserved peptide upstream open reading frame 19)S.X.H.G.
0.2034.6PtpAffx.225809.1.S1_atpmrna45415hypothetical protein-5e-1At4g23210protein kinase family proteinS.X.H.G.
0.1423.5PtpAffx.202098.1.S1_atpmrna4179hypothetical protein-2e+0At5g64880unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.499.9GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
14.999.5GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
11.099.1GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
8.098.4GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
7.198.1GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.998.0GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
2.691.3GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.886.4GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue series
1.178.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-859Ptp.3871.1.S1_s_atCA926586hypothetical protein-5e-10At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.162e-859Ptp.3871.1.S1_atCA926586hypothetical protein-5e-10At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.111e-654PtpAffx.69001.1.A1_atCV274768--2e-8At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.171e-654PtpAffx.12620.1.A1_atCV273099hypothetical protein-2e-24At1g15380lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.023e-136PtpAffx.200809.1.S1_x_atpmrna1587hypothetical protein-6e-1At2g43150proline-rich extensin-like family proteinC.G.S.X.
0.021e+034PtpAffx.70726.1.S1_atBU894343NPR1/NIM1-like regulatory protein /// hypothetical protein /// hypothetical protein-9e-6At4g19660NPR4 (NPR1-like protein 4)C.G.S.X.
0.021e+034PtpAffx.24257.1.A1_atCV267383hypothetical protein-3e-2At3g03290universal stress protein (USP) family proteinC.G.S.X.
0.021e+034PtpAffx.210797.1.S1_atpmrna21199NAC domain protein, IPR003441-3e-21At1g62700ANAC026C.G.S.X.
0.031e+034PtpAffx.200029.1.S1_atpmrna52hypothetical protein-7e-9At3g13600calmodulin-binding family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.223e-1375Arabidopsis thalianaAt1g15380838107lactoylglutathione lyase family protein / glyoxalase I family proteinF:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPOMFA---C.G.S.X.
0.491e-1687Glycine maxGmaAffx.93495.1.S1_atCF809220--9e-5At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.047e+030Hordeum vulgareS0001000056H02F1_atS0001000056H02F1--2e-1At2g42530COR15B (COLD REGULATED 15B)C.G.S.X.
0.025e-136Oryza sativaOs.16099.1.S1_at---0C.G.S.X.
0.044e+032Triticum aestivumTaAffx.24121.1.S1_atCA724779--2e-1At1g11590pectin methylesterase, putativeC.G.S.X.
0.112e-857Vitis vinifera1612866_atCB349090hypothetical protein LOC100247488-6e-19At1g80160lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.046e+030Zea maysZmAffx.1088.1.A1_atAW037041--2e-1At3g30845unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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