Gene omics information

Query gene ID PtpAffx.206588.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.206588.1.S1_atpmrna13065hypothetical protein-2e-26At5g06200integral membrane family proteinS.X.H.G.
0.8397.0PtpAffx.204411.1.S1_atpmrna8665hypothetical protein-1e-15At2g27370integral membrane family proteinS.X.H.G.
0.8397.0PtpAffx.200218.1.S1_atpmrna408hypothetical protein-9e-5At4g13580disease resistance-responsive family proteinS.X.H.G.
0.8096.0Ptp.2996.2.A1_atCV255177hypothetical protein-4e-10At5g51680hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.6791.1PtpAffx.200219.1.S1_atpmrna409hypothetical protein-3e-23At3g24020disease resistance-responsive family proteinS.X.H.G.
0.2136.5PtpAffx.6197.1.S1_atDN492716hypothetical protein-5e-4At1g07730-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.199.4GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
11.699.2GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
9.198.7GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
8.398.5GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.995.1GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.694.5GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
3.293.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.830735PtpAffx.213437.1.S1_atpmrna26270hypothetical protein-3e-23At5g06200integral membrane family proteinC.G.S.X.
0.681e-81303PtpAffx.213436.1.S1_atpmrna26269hypothetical protein-3e-19At5g06200integral membrane family proteinC.G.S.X.
0.411e-44180PtpAffx.206587.1.S1_atpmrna13064hypothetical protein-1e-17At5g06200integral membrane family proteinC.G.S.X.
0.182e-1273PtpAffx.204543.1.S1_atpmrna8919hypothetical protein-3e-2At5g06200integral membrane family proteinC.G.S.X.
0.103e-240PtpAffx.204411.1.S1_atpmrna8665hypothetical protein-1e-15At2g27370integral membrane family proteinC.G.S.X.
0.041e-138PtpAffx.207865.1.S1_atpmrna15613hypothetical protein-9e-1At5g15290integral membrane family proteinC.G.S.X.
0.024e-136PtpAffx.4670.1.A1_atCV281302--3e-5At5g66730zinc finger (C2H2 type) family proteinC.G.S.X.
0.034e-136PtpAffx.44202.1.A1_atCV241343--2e-2At5g46780VQ motif-containing proteinC.G.S.X.
0.034e-136PtpAffx.29876.1.S1_atCX182992hypothetical protein-2e-9At5g22000RHF2A (RING-H2 GROUP F2A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.362e-26119Arabidopsis thalianaAt5g06200830507integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P---C.G.S.X.
0.411e-1687Glycine maxGma.4750.1.S1_atAW310120--2e-9At5g06200integral membrane family proteinC.G.S.X.
0.046e-134Hordeum vulgareEBem05_SQ002_B05_atEBem05_SQ002_B05--2e+0At4g16447unknown proteinC.G.S.X.
0.021e-138Oryza sativaOsAffx.14305.1.S1_at---0C.G.S.X.
0.041e-344Triticum aestivumTaAffx.113254.1.S1_atCA616902--6e-2At4g02250invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.049e-236Vitis vinifera1616177_atBQ800589similar to 3-methyladenine DNA glycosylase, putative; 31680-30045-2e+1At5g42630ATS (ABERRANT TESTA SHAPE)C.G.S.X.
0.035e-134Zea maysZm.18026.1.A1_atCF636657--3e-1At4g28240wound-responsive protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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