Gene omics information

Query gene ID PtpAffx.205785.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6187.0PtpAffx.205785.1.S1_atpmrna11442hypothetical protein-4e-33At1g27620transferase family proteinS.X.H.G.
0.4369.7Ptp.8039.1.S1_atAJ770090hypothetical protein-4e-1At2g01610invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.4167.7PtpAffx.102128.1.A1_atCV236844hypothetical protein-1e-7At5g03700PAN domain-containing proteinS.X.H.G.
0.3661.6Ptp.4034.2.S1_s_atCV243854hypothetical protein-9e-15At2g28790osmotin-like protein, putativeS.X.H.G.
0.2850.5PtpAffx.28677.1.S1_atAI166422hypothetical protein-8e-14At1g27620transferase family proteinS.X.H.G.
0.2543.6PtpAffx.214395.1.S1_atpmrna28007hypothetical protein-2e-24At4g30270MERI5B (meristem-5)S.X.H.G.
0.2441.8PtpAffx.215737.1.S1_atpmrna30101ABC transporter family, retinal flippase subfamily-2e-18At5g61730ATATH11S.X.H.G.
0.2136.5PtpAffx.112384.1.S1_s_atDN500495hypothetical protein-3e-7At3g23730xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeS.X.H.G.
0.1830.8PtpAffx.220022.1.S1_s_atpmrna36269hypothetical protein-2e+0At1g53610unknown proteinS.X.H.G.
0.1729.1PtpAffx.43846.1.A1_atCV256274hypothetical protein-2e+0At3g06000leucine-rich repeat family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.599.6GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
16.099.6GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
10.999.1GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.696.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
4.095.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
3.995.1GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.794.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
3.494.0GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8701536PtpAffx.201638.1.S1_atpmrna3250hypothetical protein-1e-23At1g27620transferase family proteinC.G.S.X.
0.500854PtpAffx.28677.1.S1_atAI166422hypothetical protein-8e-14At1g27620transferase family proteinC.G.S.X.
0.019e-136PtpAffx.220918.1.S1_atpmrna37403hypothetical protein-7e-20At2g35130pentatricopeptide (PPR) repeat-containing proteinC.G.S.X.
0.019e-136PtpAffx.211652.1.S1_atpmrna22829hypothetical protein-8e-10At4g01400-C.G.S.X.
0.019e-136PtpAffx.210439.1.S1_atpmrna20500aminophospholipid ATPase-6e-65At1g68710haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.019e-136PtpAffx.210439.1.S1_s_atpmrna20500aminophospholipid ATPase-6e-65At1g68710haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.029e-136PtpAffx.209839.1.S1_s_atpmrna19399hypothetical protein-7e-1At3g08010ATAB2C.G.S.X.
0.029e-136PtpAffx.209839.1.S1_atpmrna19399hypothetical protein-7e-1At3g08010ATAB2C.G.S.X.
0.029e-136Ptp.2511.1.S1_atCK093731hypothetical protein-1e+0At5g10330HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.224e-33143Arabidopsis thalianaAt1g27620839654transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB---C.G.S.X.
0.165e-24113Glycine maxGmaAffx.51045.1.S1_atBM522713--2e-7At1g27620transferase family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig23208_atContig23208--3e-1At4g30460glycine-rich proteinC.G.S.X.
0.025e+034Oryza sativaOsAffx.12583.1.S1_at---0C.G.S.X.
0.023e+034Triticum aestivumTaAffx.23904.1.S1_atCA728610--2e-2At4g31290ChaC-like family proteinC.G.S.X.
0.027e-134Vitis vinifera1607826_atCF210018--1e+0At5g07571-C.G.S.X.
0.021e+034Zea maysZm.2331.1.S1_x_atAY106132.1protein induced upon tuberization-2e+0At3g44718-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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