Gene omics information

Query gene ID PtpAffx.205574.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6791.1PtpAffx.205574.1.S1_x_atpmrna11015hypothetical protein-8e-53At1g76990ACR3S.X.H.G.
0.6791.1PtpAffx.205574.1.S1_atpmrna11015hypothetical protein-8e-53At1g76990ACR3S.X.H.G.
0.5582.2PtpAffx.7604.7.A1_atCV261169--2e+0At1g54217Expressed proteinS.X.H.G.
0.2238.3PtpAffx.205070.1.S1_atpmrna10047hypothetical protein-1e-1At5g60800heavy-metal-associated domain-containing proteinS.X.H.G.
0.1118.1PtpAffx.22176.1.A1_atCV239407hypothetical protein-1e-2At3g03020unknown proteinS.X.H.G.
0.0812.9PtpAffx.115064.1.A1_atCV233955l-ascorbate oxidase precursor-2e-15At5g21105L-ascorbate oxidase/ copper ion binding / oxidoreductaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
17.399.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
15.699.5GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
8.698.6GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
7.398.2GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
6.497.7GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.396.9GSM372099Clone3200_LPI5_N+_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.196.8GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.892.1GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.691.3GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.389.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0002652PtpAffx.205574.1.S1_s_atpmrna11015hypothetical protein-8e-53At1g76990ACR3C.G.S.X.
1.0002652PtpAffx.205574.1.S1_atpmrna11015hypothetical protein-8e-53At1g76990ACR3C.G.S.X.
0.8901959PtpAffx.201830.1.S1_s_atpmrna3647hypothetical protein-1e-57At1g76990ACR3C.G.S.X.
0.086e-550PtpAffx.148470.1.S1_atCN519244hypothetical protein-2e-45At1g69040ACR4 (ACT REPEAT 4)C.G.S.X.
0.024e-344PtpAffx.206804.1.S1_atpmrna13509--3e-6At5g25320ACT domain-containing proteinC.G.S.X.
0.034e-344Ptp.3230.1.S1_atBU816542hypothetical protein-1e-3At3g01990ACR6C.G.S.X.
0.051e-242PtpAffx.207437.1.S1_atpmrna14768hypothetical protein-3e-9At5g65890ACR1 (ACT Domain Repeat 1)C.G.S.X.
0.066e-240PtpAffx.211410.1.S1_atpmrna22361hypothetical protein-5e-8At5g65890ACR1 (ACT Domain Repeat 1)C.G.S.X.
0.022e-138PtpAffx.211506.1.S1_s_atpmrna22547AP2/ERF domain-containing transcription factor-5e-4At5g19790RAP2.11 (related to AP2 11)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.418e-53208Arabidopsis thalianaAt1g76990844035ACR3F:amino acid binding;P:nitrogen compound metabolic process, metabolic process;C:cytosol;BOP---C.G.S.X.
0.307e-1479Glycine maxGmaAffx.65255.1.A1_atBU545616--1e-7At1g76990ACR3C.G.S.X.
0.023e-136Hordeum vulgareHVSMEb0007M18r2_s_atHVSMEb0007M18r2--2e+0At5g17073unknown proteinC.G.S.X.
0.045e-344Oryza sativaOs02g0555600AK100703.1-Amino acid-binding ACT domain containing protein2e-5At1g76990ACR3C.G.S.X.
0.023e+034Triticum aestivumTaAffx.123475.2.S1_atCA597175--1e+0At2g32500-C.G.S.X.
0.212e-38159Vitis vinifera1607354_atCB968898hypothetical protein LOC100250578-2e-2At1g76990ACR3C.G.S.X.
0.042e-240Zea maysZm.15411.1.A1_atCA399900--4e-3At1g76990ACR3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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