Gene omics information

Query gene ID PtpAffx.205346.1.S1_a_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7794.9PtpAffx.205346.1.S1_a_atpmrna10583hypothetical protein-1e+0At3g50610unknown proteinS.X.H.G.
0.0812.9PtpAffx.201625.1.S1_atpmrna3216hypothetical protein-7e-28At1g75520SRS5 (SHI-RELATED SEQUENCE 5)S.X.H.G.
0.012.2PtpAffx.215130.1.S1_atpmrna29139hypothetical protein-7e-8At1g32415pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.000.4Ptp.5087.1.S1_s_atCF231827hypothetical protein-9e-8At3g07480electron carrier/ iron-sulfur cluster bindingS.X.H.G.
0.000.4Ptp.6493.1.S1_atCK091970--3e-5At3g28510AAA-type ATPase family proteinS.X.H.G.
0.000.4PtpAffx.249.481.S1_s_atCX180108--5e-37At5g13490AAC2 (ADP/ATP carrier 2)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.899.4GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
13.799.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
6.497.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
4.896.4GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.696.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
4.696.2GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.894.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
3.393.7GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
2.691.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.389.8GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001047PtpAffx.205346.1.S1_atpmrna10583hypothetical protein-1e+0At3g50610unknown proteinC.G.S.X.
0.233e-32139PtpAffx.207279.1.S1_atpmrna14442hypothetical protein-2e-3At5g66815unknown proteinC.G.S.X.
0.134e-1685PtpAffx.214976.1.S1_x_atpmrna28911hypothetical protein-6e-4At5g66815unknown proteinC.G.S.X.
0.134e-1685PtpAffx.214976.1.S1_atpmrna28911hypothetical protein-6e-4At5g66815unknown proteinC.G.S.X.
0.029e-238Ptp.6821.1.S1_atBU888272hypothetical protein-8e-10At2g25737unknown proteinC.G.S.X.
0.024e-136PtpAffx.204234.1.S1_s_atpmrna8324hypothetical protein-4e-24At4g15850ATRH1C.G.S.X.
0.034e-136Ptp.1600.1.A1_s_atCK092016chromatin remodeling complex subunit-5e-23At5g14170CHC1C.G.S.X.
0.011e+034PtpAffx.214071.1.S1_atpmrna27405--5e-93At4g33010AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)C.G.S.X.
0.031e+034PtpAffx.213272.1.S1_atpmrna25959hypothetical protein-2e-1At4g33925unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e+034Arabidopsis thalianaAt3g50610824224unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB---C.G.S.X.
0.074e-136Glycine maxGmaAffx.43297.1.A1_atAI442864--4e+0At5g52760heavy-metal-associated domain-containing proteinC.G.S.X.
0.032e+032Hordeum vulgareContig15190_atContig15190--5e+0At5g03130unknown proteinC.G.S.X.
0.048e+032Oryza sativaOs12g04454009640.m02476--2e-1At2g22080unknown proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.51173.1.S1_atCA729953--8e+0At3g55252-C.G.S.X.
0.033e-134Vitis vinifera1614169_atCB970892--1e+0Atmg00610-C.G.S.X.
0.037e+030Zea maysZm.5664.1.A1_atAI629862Inositol 1,3,4,5,6-pentakisphosphate 2-kinase-4e+0At3g26080plastid-lipid associated protein PAP / fibrillin family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage