Gene omics information

Query gene ID PtpAffx.205285.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.205285.1.S1_atpmrna10476hypothetical protein-3e-19At4g35470leucine-rich repeat family proteinS.X.H.G.
0.6187.0PtpAffx.150917.1.S1_atCK103462hypothetical protein-1e-28At5g63860UVR8 (UVB-RESISTANCE 8)S.X.H.G.
0.4673.7PtpAffx.95783.1.A1_atCV232900hypothetical protein-9e-5At1g73740glycosyl transferase family 28 proteinS.X.H.G.
0.4673.7PtpAffx.58772.2.A1_a_atCA930502--5e-7At1g01630SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeS.X.H.G.
0.3559.7Ptp.4466.1.S1_atBU829478hypothetical protein-9e-51At3g02870VTC4S.X.H.G.
0.1932.7PtpAffx.143676.3.S1_atCN522207formyltetrahydrofolate deformylase-3e-17At4g17360formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase/ methyltransferaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.499.0GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
9.998.9GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
8.198.5GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
7.798.3GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
7.798.3GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
6.697.9GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM372044Clone1979_LPI5_N+_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.389.8GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.886.4GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
1.482.3GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9101697PtpAffx.207242.1.S1_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinC.G.S.X.
0.9101697PtpAffx.207242.1.S1_s_atpmrna14353hypothetical protein-2e-20At4g35470leucine-rich repeat family proteinC.G.S.X.
0.181e-80301PtpAffx.31091.1.S1_atCV248332--1e+0At2g39790mitochondrial glycoprotein family protein / MAM33 family proteinC.G.S.X.
0.011e-346PtpAffx.217374.1.S1_atpmrna32605hypothetical protein-3e-1At4g36420ribosomal protein L12 family proteinC.G.S.X.
0.021e-346PtpAffx.211928.1.S1_atpmrna23424hypothetical protein-2e+0At2g33793unknown proteinC.G.S.X.
0.021e-346PtpAffx.205038.1.S1_atpmrna9976hypothetical protein-5e-3At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)C.G.S.X.
0.035e-344PtpAffx.90384.1.S1_atCK108669--5e-1At4g16610zinc finger (C2H2 type) family proteinC.G.S.X.
0.027e-240PtpAffx.219105.1.S1_s_atpmrna34927hypothetical protein-2e-1At3g05830-C.G.S.X.
0.017e-240PtpAffx.203444.1.S1_atpmrna6862hypothetical protein-5e-44At3g24240leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.293e-1997Arabidopsis thalianaAt4g35470829699leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:plasma membrane;MPBOFAV---C.G.S.X.
0.305e-49196Glycine maxGmaAffx.46385.2.S1_atCA801989--4e-28At4g35470leucine-rich repeat family proteinC.G.S.X.
0.033e-550Hordeum vulgareContig11084_atContig11084--2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.083e-861Oryza sativaOs08g0511700AK065422.1-Leucine-rich repeat, typical subtype containingprotein2e-4At4g35470leucine-rich repeat family proteinC.G.S.X.
0.036e-550Triticum aestivumTaAffx.59237.1.S1_atCA605498--3e-1At4g36570ATRL3 (ARABIDOPSIS RAD-LIKE 3)C.G.S.X.
0.029e-134Vitis vinifera1622546_atCB968779--3e-17At5g20840phosphoinositide phosphatase family proteinC.G.S.X.
0.029e-238Zea maysZm.972.1.A1_atBE186797hypothetical protein LOC100278676-2e+0At4g04925unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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