Gene omics information

Query gene ID PtpAffx.205177.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5380.5PtpAffx.205177.1.S1_atpmrna10251hypothetical protein-4e-93At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)S.X.H.G.
0.6187.0PtpAffx.225253.1.S1_atpmrna44474hypothetical protein-1e-2At5g44410FAD-binding domain-containing proteinS.X.H.G.
0.5582.2PtpAffx.161461.1.S1_atCV130586hypothetical protein-1e-49At3g57550AGK2 (GUANYLATE KINASE)S.X.H.G.
0.1423.5PtpAffx.159916.1.A1_atCV255317hypothetical protein-1e+0At5g02090unknown proteinS.X.H.G.
0.1321.6Ptp.7558.1.A1_atCA926122hypothetical protein-6e-71At5g13490AAC2 (ADP/ATP carrier 2)S.X.H.G.
0.1016.3PtpAffx.224513.1.S1_s_atpmrna43126hypothetical protein-1e-5At4g19810glycosyl hydrolase family 18 proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.399.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
24.999.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
13.999.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
10.299.0GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
5.797.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.987.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
0.974.2GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
0.769.4GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.601e-155549PtpAffx.219447.1.S1_s_atpmrna35368hypothetical protein-4e-42At2g22290ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D)C.G.S.X.
0.501e-38161Ptp.5567.1.S1_atCK098494--1e-44At2g44610RAB6AC.G.S.X.
0.356e-31135PtpAffx.19719.1.A1_atCV255300--3e-52At2g44610RAB6AC.G.S.X.
0.319e-24111PtpAffx.3422.1.S1_atCV266812hypothetical protein-6e-75At2g44610RAB6AC.G.S.X.
0.047e-342PtpAffx.4217.1.A1_s_atCV261602hypothetical protein-7e-71At1g02130ARA-5 (ARABIDOPSIS RAS 5)C.G.S.X.
0.023e-240Ptp.6386.1.S1_atCV256915hypothetical protein-2e-49At5g65270AtRABA4a (Arabidopsis Rab GTPase homolog A4a)C.G.S.X.
0.033e-240Ptp.4475.1.S1_s_atBU826793hypothetical protein-3e-55At5g03530RABC2A (RAB GTPASE HOMOLOG C2A)C.G.S.X.
0.033e-240Ptp.1488.1.S1_a_atCV243292hypothetical protein-8e-34At2g31680AtRABA5d (Arabidopsis Rab GTPase homolog A5d)C.G.S.X.
0.041e-138PtpAffx.4217.2.S1_s_atCV250228hypothetical protein-2e-28At1g02130ARA-5 (ARABIDOPSIS RAS 5)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.714e-93341Arabidopsis thalianaAt5g10260830890AtRABH1e (Arabidopsis Rab GTPase homolog H1e)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVA---C.G.S.X.
0.442e-31137Glycine maxGma.3568.1.S1_x_atBI941735--1e-54At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)C.G.S.X.
0.465e-60230Hordeum vulgareContig7349_atContig7349--1e-66At2g44610RAB6AC.G.S.X.
0.488e-25115Oryza sativaOsAffx.16506.1.S1_at---0C.G.S.X.
0.438e-33141Triticum aestivumTa.28749.1.S1_a_atCK213968--2e-59At2g44610RAB6AC.G.S.X.
0.511e-50198Vitis vinifera1621785_atCF213480hypothetical protein LOC100242004-2e-101At2g44610RAB6AC.G.S.X.
0.313e-24111Zea maysZm.8122.1.A1_atBM736458hypothetical protein LOC100274535-4e-73At2g44610RAB6AC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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