Gene omics information

Query gene ID PtpAffx.204922.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7493.8PtpAffx.204922.1.S1_atpmrna9736hypothetical protein-4e-12At3g47000glycosyl hydrolase family 3 proteinS.X.H.G.
0.5683.9PtpAffx.201028.1.S1_s_atpmrna2012hypothetical protein-2e-19At5g14220HEMG2S.X.H.G.
0.5480.8PtpAffx.111842.1.A1_s_atBU810240hypothetical protein-2e-13At2g34630geranyl diphosphate synthase, putative / GPPS, putative / dimethylallyltransferase, putative / prenyl transferase, putativeS.X.H.G.
0.4975.7PtpAffx.132904.1.S1_atCX187091hypothetical protein-1e-22At4g09520catalytic/ metal ion binding / phosphoglycerate mutaseS.X.H.G.
0.3964.6PtpAffx.156608.1.S1_atBU875048hypothetical protein-4e-16At4g18440adenylosuccinate lyase, putative / adenylosuccinase, putativeS.X.H.G.
0.3964.6PtpAffx.201028.1.S1_atpmrna2012hypothetical protein-2e-19At5g14220HEMG2S.X.H.G.
0.3559.7PtpAffx.84497.1.S1_s_atCF231611hypothetical protein-9e-17At3g18140transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.3458.3Ptp.3086.1.S1_s_atBU832807hypothetical protein-4e-47At2g13560malate oxidoreductase, putativeS.X.H.G.
0.3458.3PtpAffx.6986.1.S1_atCK101561histone acetyltransferase complex component /// histone acetyltransferase complex component-2e+0At2g30570PSBW (PHOTOSYSTEM II REACTION CENTER W)S.X.H.G.
0.3153.7PtpAffx.99407.1.S1_atCN520990hypothetical protein-4e-56At5g53850haloacid dehalogenase-like hydrolase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.596.1GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.395.8GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.894.9GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.894.9GSM244432non infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.594.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.293.5GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.293.5GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.892.1GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.691.3GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.389.8GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.286e-123442PtpAffx.101918.1.A1_atCV245172hypothetical protein-3e-2At3g47010hydrolase, hydrolyzing O-glycosyl compoundsC.G.S.X.
0.219e-45182PtpAffx.200749.1.S1_atpmrna1448--2e+0At4g00250DNA-binding storekeeper protein-relatedC.G.S.X.
0.065e-654PtpAffx.53076.1.S1_atCX658030hypothetical protein-7e-23At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.093e-448PtpAffx.207517.1.S1_atpmrna14928--1e-30At5g04885glycosyl hydrolase family 3 proteinC.G.S.X.
0.061e-346PtpAffx.220776.1.S1_atpmrna37203hypothetical protein-1e-37At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.041e-346PtpAffx.207518.1.S1_atpmrna14929hypothetical protein-5e-24At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.075e-344PtpAffx.204438.1.S1_atpmrna8715hypothetical protein-1e-9At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.023e-138PtpAffx.39414.1.A1_atCK094173--1e+0At3g10110MEE67 (maternal effect embryo arrest 67)C.G.S.X.
0.013e-138PtpAffx.205161.1.S1_atpmrna10214hypothetical protein-2e-16At5g10370helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.244e-1273Arabidopsis thalianaAt3g47000823853glycosyl hydrolase family 3 proteinF:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAM---C.G.S.X.
0.172e-36155Glycine maxGmaAffx.7767.1.S1_atBE191077--2e-1At5g58210hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.063e-859Hordeum vulgareContig21549_atContig21549--1e-1At3g47050glycosyl hydrolase family 3 proteinC.G.S.X.
0.071e-140Oryza sativaOs05g0449600AK063607.1-Exoglucanase precursor6e-1At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.022e-552Triticum aestivumTa.27010.3.S1_atBJ301684--4e-8At5g20940glycosyl hydrolase family 3 proteinC.G.S.X.
0.033e-136Vitis vinifera1611747_atCF608890hypothetical protein LOC100246224-3e-8At5g20950glycosyl hydrolase family 3 proteinC.G.S.X.
0.041e-757Zea maysZm.8577.1.A1_atBM338783--1e-4At3g47050glycosyl hydrolase family 3 proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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