Gene omics information

Query gene ID PtpAffx.204878.1.S1_at
Gene name NAC domain protein, IPR003441
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6891.3PtpAffx.204878.1.S1_atpmrna9641NAC domain protein, IPR003441-1e-2At5g63790ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102)S.X.H.G.
0.3661.6PtpAffx.219997.1.S1_atpmrna36225hypothetical protein-7e-10At4g16970ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseS.X.H.G.
0.2645.2PtpAffx.213668.1.S1_atpmrna26689hypothetical protein-1e-25At3g51740IMK2 (INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 2)S.X.H.G.
0.2441.8PtpAffx.225505.1.S1_atpmrna44896hypothetical protein-5e-35At2g36400AtGRF3 (GROWTH-REGULATING FACTOR 3)S.X.H.G.
0.2340.5PtpAffx.205188.1.S1_atpmrna10274hypothetical protein-2e+0At5g65120unknown proteinS.X.H.G.
0.2340.5PtpAffx.211672.1.S1_atpmrna22880hypothetical protein-5e-3At2g46980unknown proteinS.X.H.G.
0.2340.5PtpAffx.43550.1.A1_atCV267290--8e-1At5g42850-S.X.H.G.
0.2136.5PtpAffx.42652.1.S1_atCV268229histone H3-1e-1At1g01370HTR12S.X.H.G.
0.2136.5PtpAffx.2265.9.A1_atCV234913hypothetical protein-4e+0At4g13968-S.X.H.G.
0.1932.7PtpAffx.201290.1.S1_atpmrna2561hypothetical protein-7e-16At5g55820unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.099.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
10.699.0GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
10.399.0GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
8.798.6GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
6.898.0GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
4.896.4GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
3.794.7GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue series
3.293.5GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
3.293.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.545e-37155PtpAffx.204879.1.S1_atpmrna9642NAC domain protein, IPR003441-6e-5At1g01720ATAF1C.G.S.X.
0.342e-1479PtpAffx.223447.1.S1_s_atpmrna41462NAC domain protein, IPR003441-3e-5At3g04070anac047 (Arabidopsis NAC domain containing protein 47)C.G.S.X.
0.572e-1479PtpAffx.200817.1.S1_atpmrna1599NAC domain protein, IPR003441-6e-5At3g04070anac047 (Arabidopsis NAC domain containing protein 47)C.G.S.X.
0.209e-1167PtpAffx.203125.1.S1_s_atpmrna6200NAC domain protein, IPR003441-3e-2At3g10490anac052 (Arabidopsis NAC domain containing protein 52)C.G.S.X.
0.038e-548PtpAffx.4325.1.S1_atCV241094NAC domain protein, IPR003441-1e-26At1g52890ANAC019 (Arabidopsis NAC domain containing protein 19)C.G.S.X.
0.122e-240PtpAffx.214396.1.S1_atpmrna28008NAC domain protein, IPR003441-1e-3At1g77450anac032 (Arabidopsis NAC domain containing protein 32)C.G.S.X.
0.042e-240PtpAffx.210237.1.S1_atpmrna20155NAC domain protein, IPR003441-1e-41At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)C.G.S.X.
0.058e-238PtpAffx.209704.1.S1_atpmrna19151NAC domain protein, IPR003441-1e-23At1g52880NAM (NO APICAL MERISTEM)C.G.S.X.
0.048e-238PtpAffx.203774.1.S1_atpmrna7455NAC domain protein, IPR003441-3e-30At1g61110anac025 (Arabidopsis NAC domain containing protein 25)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-240Arabidopsis thalianaAt5g63790836499ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102)Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings.---C.G.S.X.
0.053e-136Glycine maxGmaAffx.10793.1.S1_atBU965494--3e-3At1g69490NAP (NAC-like, activated by AP3/PI)C.G.S.X.
0.044e-134Hordeum vulgareContig6026_atContig6026--9e-1At2g3939060S ribosomal protein L35 (RPL35B)C.G.S.X.
0.042e+034Oryza sativaOs01g02896009629.m01807-DNA-binding WRKY domain containing protein3e-4At4g01720WRKY47C.G.S.X.
0.059e-134Triticum aestivumTaAffx.108775.1.S1_atCA684251--3e+0At5g47570unknown proteinC.G.S.X.
0.041e-652Vitis vinifera1614251_atCB834298--8e-2At1g77450anac032 (Arabidopsis NAC domain containing protein 32)C.G.S.X.
0.032e+032Zea maysZm.9119.1.A1_atBM350713--6e+0At5g44570unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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