Gene omics information

Query gene ID PtpAffx.204743.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.204743.1.S1_atpmrna9337hypothetical protein-3e-1At5g46030unknown proteinS.X.H.G.
0.6791.1PtpAffx.217345.1.S1_s_atpmrna32563hypothetical protein-2e-9At4g22030F-box family proteinS.X.H.G.
0.5078.6PtpAffx.202093.1.S1_s_atpmrna4169hypothetical protein-6e-2At1g10370ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)S.X.H.G.
0.4067.0PtpAffx.205723.1.S1_x_atpmrna11295hypothetical protein-2e-5At3g22930calmodulin, putativeS.X.H.G.
0.3357.5PtpAffx.22638.1.S1_atDN503417hypothetical protein-4e-1At5g52870unknown proteinS.X.H.G.
0.2238.3PtpAffx.144812.1.S1_atDN500920hypothetical protein-1e+0At3g04630WDL1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.899.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
15.999.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
10.999.1GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
7.498.2GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.596.1GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.742e-43176PtpAffx.201201.1.S1_atpmrna2383hypothetical protein-1e+0At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinC.G.S.X.
0.143e-240PtpAffx.204742.1.S1_atpmrna9336hypothetical protein-1e+0At2g36630unknown proteinC.G.S.X.
0.113e-240PtpAffx.201200.1.S1_atpmrna2382hypothetical protein-4e+0At4g22380ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinC.G.S.X.
0.021e-138PtpAffx.210578.1.S1_atpmrna20747hypothetical protein-1e-27At5g66540-C.G.S.X.
0.044e-136PtpAffx.65149.1.A1_atCK093111hypothetical protein-3e+0At4g22235-C.G.S.X.
0.034e-136PtpAffx.28949.1.S1_s_atBU869226hypothetical protein-2e+0At5g19650OFP8 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 8)C.G.S.X.
0.044e-136PtpAffx.206321.1.S1_atpmrna12547hypothetical protein-2e-2At3g06000leucine-rich repeat family proteinC.G.S.X.
0.034e-136PtpAffx.19179.2.A1_a_atCK096989hypothetical protein-4e-4At3g49800BSD domain-containing proteinC.G.S.X.
0.024e-136PtpAffx.11154.2.S1_atCV238151hypothetical protein-7e-10At1g68490unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Arabidopsis thalianaAt5g46030834644unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA---C.G.S.X.
0.041e-138Glycine maxGmaAffx.75176.1.S1_atBF070694--2e-20At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)C.G.S.X.
0.042e+032Hordeum vulgareContig3967_atContig3967--6e-16At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
0.022e+034Oryza sativaOsAffx.2602.1.S1_at---0C.G.S.X.
0.031e+034Triticum aestivumTaAffx.65630.1.S1_atBJ235341--3e+0At4g30410transcription factorC.G.S.X.
0.033e-134Vitis vinifera1609773_atCB978867hypothetical protein LOC100261732-1e+0At3g11600unknown proteinC.G.S.X.
0.038e+030Zea maysZmAffx.718.1.A1_s_atAI739895hypothetical protein LOC100191952-3e+0At3g50780-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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