Gene omics information

Query gene ID PtpAffx.204628.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.204628.1.S1_s_atpmrna9099hypothetical protein-3e+0At4g00232unknown proteinS.X.H.G.
0.5784.2PtpAffx.206196.1.S1_atpmrna12304hypothetical protein-4e-19At2g19090unknown proteinS.X.H.G.
0.4774.6PtpAffx.209407.1.S1_atpmrna18634hypothetical protein-2e-39At2g38970zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.3863.7Ptp.2035.1.S1_s_atBU894397hypothetical protein-3e-21At4g24060Dof-type zinc finger domain-containing proteinS.X.H.G.
0.3153.7PtpAffx.9361.1.A1_atCV241621hypothetical protein-1e-6At1g77660MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedS.X.H.G.
0.2645.2PtpAffx.221194.1.S1_x_atpmrna37884hypothetical protein-1e-2At5g42830transferase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.299.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
9.398.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
4.996.5GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
3.894.9GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplar
3.494.0GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.992.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0002504PtpAffx.204628.1.S1_atpmrna9099hypothetical protein-3e+0At4g00232unknown proteinC.G.S.X.
0.7101205PtpAffx.204629.1.S1_atpmrna9100hypothetical protein-7e-1At4g08460protein binding / zinc ion bindingC.G.S.X.
0.012e-138PtpAffx.222879.1.S1_atpmrna40583hypothetical protein-9e-1At4g07820pathogenesis-related protein, putativeC.G.S.X.
0.012e-138PtpAffx.204726.1.S1_atpmrna9310--1e-6At3g19620glycosyl hydrolase family 3 proteinC.G.S.X.
0.029e-136PtpAffx.90699.1.A1_atCK096500--3e-5At5g18910protein kinase family proteinC.G.S.X.
0.029e-136PtpAffx.69019.1.A1_atCV273744hypothetical protein-8e-6At4g33420peroxidase, putativeC.G.S.X.
0.019e-136PtpAffx.208533.1.S1_atpmrna16931hypothetical protein-2e-13At5g18910protein kinase family proteinC.G.S.X.
0.029e-136PtpAffx.138621.2.S1_a_atAJ767138hypothetical protein-6e-12At5g19850hydrolase, alpha/beta fold family proteinC.G.S.X.
0.013e+034PtpAffx.97935.1.A1_atCV264934hypothetical protein-2e-41At1g06470phosphate translocator-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt4g00232826492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO---C.G.S.X.
0.022e-138Glycine maxGmaAffx.84491.2.A1_atAW101089--2e-1At4g09462-C.G.S.X.
0.021e+034Hordeum vulgareContig14735_atContig14735--6e-6At1g12470Pep3/Vps18/deep orange family proteinC.G.S.X.
0.023e-138Oryza sativaOs12g0409600CB645117--6e+0At5g18300anac088 (Arabidopsis NAC domain containing protein 88)C.G.S.X.
0.023e+034Triticum aestivumTaAffx.106559.1.S1_s_atCA716149--2e+1Atmg01060-C.G.S.X.
0.027e-134Vitis vinifera1615421_atCF516532hypothetical protein LOC100245217-2e-8At1g69230SP1L2 (SPIRAL1-LIKE2)C.G.S.X.
0.021e+034Zea maysZm.4439.1.A1_a_atCA404865--2e+1Atmg01240-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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