Gene omics information

Query gene ID PtpAffx.204185.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8397.0PtpAffx.204185.1.S1_atpmrna8238hypothetical protein-5e-5At5g57570-S.X.H.G.
0.2441.8PtpAffx.217157.1.S1_atpmrna32308hypothetical protein-4e+1At5g57000unknown proteinS.X.H.G.
0.2340.5Ptp.1910.1.A1_atCK092152--2e+0At5g44430PDF1.2c (plant defensin 1.2c)S.X.H.G.
0.2340.5PtpAffx.215743.1.S1_atpmrna30117hypothetical protein-3e-1At2g44910ATHB4 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4)S.X.H.G.
0.2136.5PtpAffx.16325.1.A1_atDN490646--3e+0At4g29285LCR24 (Low-molecular-weight cysteine-rich 24)S.X.H.G.
0.2136.5PtpAffx.205451.1.S1_atpmrna10781--2e+0At4g33600unknown proteinS.X.H.G.
0.1932.7Ptp.2282.3.A1_atCV238349--2e-4At1g30910molybdenum cofactor sulfurase family proteinS.X.H.G.
0.1830.8PtpAffx.216491.1.S1_atpmrna31280hypothetical protein-8e-27At5g35560DENN (AEX-3) domain-containing proteinS.X.H.G.
0.1830.8PtpAffx.214120.1.S1_atpmrna27487hypothetical protein-7e-2At3g49796unknown proteinS.X.H.G.
0.1729.1PtpAffx.209845.1.S1_atpmrna19409hypothetical protein-9e-1At3g04940CYSD1 (CYSTEINE SYNTHASE D1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.299.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
13.199.4GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
7.398.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
3.995.1GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
3.193.2GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.992.5GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.490.4GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.389.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.289.3GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
2.188.6GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.391e-34147PtpAffx.209933.1.S1_atpmrna19592hypothetical protein-7e-1At5g57570-C.G.S.X.
0.366e-33141PtpAffx.205425.1.S1_atpmrna10731hypothetical protein-3e-3At5g46030unknown proteinC.G.S.X.
0.381e-30133PtpAffx.223811.1.S1_atpmrna42011hypothetical protein-2e-1At1g12665-C.G.S.X.
0.228e-2097PtpAffx.213170.1.S1_atpmrna25763hypothetical protein-8e-2At1g35900unknown proteinC.G.S.X.
0.258e-1787PtpAffx.213597.1.S1_atpmrna26554hypothetical protein-1e-2At5g10910mraW methylase family proteinC.G.S.X.
0.051e-654PtpAffx.223818.1.S1_atpmrna42020hypothetical protein-2e+0At3g17170RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3)C.G.S.X.
0.022e-550PtpAffx.203105.1.S1_atpmrna6150hypothetical protein-4e-3At2g35540DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.021e-344PtpAffx.216095.1.S1_atpmrna30668hypothetical protein-0At5g54260MRE11 (meiotic recombination 11)C.G.S.X.
0.021e-344PtpAffx.213898.1.S1_atpmrna27100hypothetical protein-2e-11At5g39970catalyticC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.075e-548Arabidopsis thalianaAt5g57570835861-F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO---C.G.S.X.
0.052e-240Glycine maxGmaAffx.8146.1.A1_atBE661764--2e-1At5g64330NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3)C.G.S.X.
0.072e-238Hordeum vulgareEBro01_SQ001_M06_atEBro01_SQ001_M06--8e-1At5g20885zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.094e-446Oryza sativaOs.16323.3.A1_at---0C.G.S.X.
0.053e-342Triticum aestivumTaAffx.30669.1.S1_atCA623042--1e+0At1g63057unknown proteinC.G.S.X.
0.052e-134Vitis vinifera1620915_atCF511488--2e-1At2g17740DC1 domain-containing proteinC.G.S.X.
0.051e+032Zea maysZm.9557.1.A1_atBI423687Glycine cleavage H-protein-2e-2At1g32470glycine cleavage system H protein, mitochondrial, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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