Gene omics information

Query gene ID PtpAffx.204145.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5582.2PtpAffx.204145.1.S1_s_atpmrna8170hypothetical protein-5e-97At3g01300protein kinase, putativeS.X.H.G.
0.6086.0PtpAffx.201300.1.S1_s_atpmrna2582hypothetical protein-1e-34At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.6086.0PtpAffx.1276.1.S1_atCK091051hypothetical protein-9e-73At5g26751ATSK11S.X.H.G.
0.5380.5PtpAffx.163113.1.S1_s_atCX182719hypothetical protein-2e-4At3g03330short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.4774.6PtpAffx.85760.1.S1_s_atCX181147hypothetical protein-6e-6At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)S.X.H.G.
0.4471.9PtpAffx.218468.1.S1_atpmrna34094hypothetical protein-0At3g25800PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)S.X.H.G.
0.4369.7PtpAffx.3033.1.S1_atCK101033hypothetical protein-1e-26At1g43690ubiquitin interaction motif-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.293.5GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.892.1GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
2.892.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
2.791.8GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplar
2.691.3GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9001885PtpAffx.213907.1.S1_s_atpmrna27117hypothetical protein-5e-54At3g28690protein kinase, putativeC.G.S.X.
0.6701308PtpAffx.213905.1.S1_atpmrna27115hypothetical protein-3e-107At5g15080protein kinase, putativeC.G.S.X.
0.271e-160567PtpAffx.127904.1.A1_atCV275311hypothetical protein-3e-2At3g01300protein kinase, putativeC.G.S.X.
0.407e-128458PtpAffx.208329.1.S1_atpmrna16559hypothetical protein-5e-83At3g01300protein kinase, putativeC.G.S.X.
0.603e-105383PtpAffx.204085.1.S1_s_atpmrna8063hypothetical protein-6e-35At3g28690protein kinase, putativeC.G.S.X.
0.603e-105383PtpAffx.204085.1.S1_atpmrna8063hypothetical protein-6e-35At3g28690protein kinase, putativeC.G.S.X.
0.272e-88327PtpAffx.213906.1.S1_x_atpmrna27116hypothetical protein-7e-9At3g28690protein kinase, putativeC.G.S.X.
0.191e-73278Ptp.414.1.S1_atCV229747hypothetical protein-5e+0At5g26970unknown proteinC.G.S.X.
0.376e-73276PtpAffx.19017.1.S1_s_atCV131497hypothetical protein-8e-37At3g28690protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.545e-97355Arabidopsis thalianaAt3g01300820989protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA---C.G.S.X.
0.351e-49198Glycine maxGmaAffx.8472.1.S1_atAW350979--2e-40At3g01300protein kinase, putativeC.G.S.X.
0.357e-98357Hordeum vulgareContig11783_atContig11783--6e-36At3g01300protein kinase, putativeC.G.S.X.
0.405e-74280Oryza sativaOs09g0361100AK064216.1-Protein kinase APK1A (EC 2.7.1.-)1e-70At5g15080protein kinase, putativeC.G.S.X.
0.058e-1065Triticum aestivumTa.5275.1.A1_atAJ615682--9e-26At2g28930APK1BC.G.S.X.
0.173e-961Vitis vinifera1615314_atCB008162--2e-5At3g28690protein kinase, putativeC.G.S.X.
0.121e-1273Zea maysZm.4078.1.A1_atBM079694protein kinase APK1A-6e-16At3g01300protein kinase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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