Gene omics information

Query gene ID PtpAffx.203959.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6287.2PtpAffx.203959.1.S1_s_atpmrna7812hypothetical protein-1e-17At3g28580AAA-type ATPase family proteinS.X.H.G.
0.4875.4PtpAffx.56861.1.A1_atCV249063hypothetical protein-9e-2At1g23510unknown proteinS.X.H.G.
0.4471.9PtpAffx.62380.1.S1_s_atBP936324hypothetical protein-1e+0At1g48940plastocyanin-like domain-containing proteinS.X.H.G.
0.4369.7PtpAffx.219237.1.S1_atpmrna35094multidrug resistance protein ABC transporter family-2e-12At1g30410ATMRP13S.X.H.G.
0.3762.3PtpAffx.102143.1.A1_s_atCV235917AP2/ERF domain-containing transcription factor-3e-10At5g51190AP2 domain-containing transcription factor, putativeS.X.H.G.
0.3762.3PtpAffx.145.1.A1_atCV269750hypothetical protein-2e-3At1g33700catalytic/ glucosylceramidaseS.X.H.G.
0.3458.3PtpAffx.84833.1.S1_atCV241171hypothetical protein-2e-1At1g60710ATB2S.X.H.G.
0.3052.0PtpAffx.213504.1.S1_atpmrna26400hypothetical protein-1e-22At4g30080ARF16 (AUXIN RESPONSE FACTOR 16)S.X.H.G.
0.1729.1PtpAffx.998.1.A1_atCV264521hypothetical protein-3e+0At5g65495unknown proteinS.X.H.G.
0.0914.6PtpAffx.18117.1.S1_s_atCK114073hypothetical protein-4e+0At2g47760ALG3S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.399.9GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
11.999.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
7.498.2GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
5.797.3GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
5.797.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
3.694.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.791.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.490.4GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.289.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.987.2GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.374e-68260PtpAffx.38964.1.S1_a_atDN490095hypothetical protein-2e-15At3g28580AAA-type ATPase family proteinC.G.S.X.
0.374e-68260PtpAffx.38964.1.S1_atDN490095--2e-15At3g28580AAA-type ATPase family proteinC.G.S.X.
0.471e-49198PtpAffx.203664.1.S1_s_atpmrna7262hypothetical protein-2e-6At5g40010AATP1 (AAA-ATPase 1)C.G.S.X.
0.233e-47190PtpAffx.38964.2.S1_atCV256768hypothetical protein-2e-5At3g28580AAA-type ATPase family proteinC.G.S.X.
0.181e-37159PtpAffx.202591.1.S1_atpmrna5190hypothetical protein-1e+0At1g73260trypsin and protease inhibitor family protein / Kunitz family proteinC.G.S.X.
0.101e-33145PtpAffx.47157.1.S1_a_atBU831408histone 2-4e-26At5g59910HTB4C.G.S.X.
0.101e-33145PtpAffx.47157.1.S1_atBU831408histone 2-4e-26At5g59910HTB4C.G.S.X.
0.241e-33145PtpAffx.202283.1.S1_atpmrna4569--3e-2At3g28510AAA-type ATPase family proteinC.G.S.X.
0.201e-27125PtpAffx.105289.1.S1_atCK097656--3e-1At2g20420succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.291e-1791Arabidopsis thalianaAt3g28580822488AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to abscisic acid stimulus;C:endoplasmic reticulum;OMBFPAV---C.G.S.X.
0.291e-24115Glycine maxGmaAffx.2047.1.S1_atCA801759--2e-14At3g28570AAA-type ATPase family proteinC.G.S.X.
0.042e-240Hordeum vulgareContig15142_atContig15142--2e-7At5g17760AAA-type ATPase family proteinC.G.S.X.
0.084e-448Oryza sativaOs12g0639400AK110532.1-AAA ATPase, central region domain containingprotein1e-2At1g43910AAA-type ATPase family proteinC.G.S.X.
0.093e-963Triticum aestivumTaAffx.128683.1.S1_x_atCA684810--2e-3At4g05340ATP bindingC.G.S.X.
0.176e-1787Vitis vinifera1615951_atCA818721hypothetical protein LOC100247372-2e-2At3g28580AAA-type ATPase family proteinC.G.S.X.
0.023e-136Zea maysZm.7056.6.A1_atCF051906RWD domain-containing protein 1-1e-2At3g52550-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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