Gene omics information

Query gene ID PtpAffx.203851.1.S1_s_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.203851.1.S1_s_atpmrna7601hypothetical protein-3e-3At1g28680transferase family proteinS.X.H.G.
0.8397.0PtpAffx.203851.1.S1_atpmrna7601hypothetical protein-3e-3At1g28680transferase family proteinS.X.H.G.
0.7794.9PtpAffx.221469.1.S1_s_atpmrna38366hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase /// hypothetical protein-3e-6At5g57840transferase family proteinS.X.H.G.
0.5078.6PtpAffx.128159.1.S1_s_atCV229156cytochrome P450-1e-5At1g73340electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingS.X.H.G.
0.4774.6PtpAffx.217928.1.S1_atpmrna33394cytochrome P450-3e-31At1g73340electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen bindingS.X.H.G.
0.2543.6PtpAffx.212132.1.S1_s_atpmrna23792hypothetical protein-3e-1At1g69170squamosa promoter-binding protein-like 6 (SPL6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.2100.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
19.699.7GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
18.699.7GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
5.196.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
2.590.9GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
2.590.9GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
0.769.4GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
0.666.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
0.563.3GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0003257PtpAffx.203851.1.S1_atpmrna7601hypothetical protein-3e-3At1g28680transferase family proteinC.G.S.X.
0.027e-240PtpAffx.64701.1.S1_x_atCV236236histone 2-3e-45At2g38810HTA8 (HISTONE H2A 8)C.G.S.X.
0.023e-138PtpAffx.21890.1.A1_atCV244942--5e-4At5g52660myb family transcription factorC.G.S.X.
0.011e+036PtpAffx.2868.1.A1_atCV257974hypothetical protein-7e-1At1g30260-C.G.S.X.
0.011e+036PtpAffx.214477.1.S1_atpmrna28155hydroxycinnamoyl CoA shikimate/quinate hydroxycinnamoyltransferase-like protein-3e-3At2g19070SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)C.G.S.X.
0.011e+036PtpAffx.210774.1.S1_atpmrna21139hypothetical protein-5e-9At5g51850unknown proteinC.G.S.X.
0.011e+036Ptp.6185.1.S1_atCV282885hypothetical protein-2e-9At2g17972unknown proteinC.G.S.X.
0.015e+034PtpAffx.24900.1.A1_atCV226672hypothetical protein-2e+0At4g20470unknown proteinC.G.S.X.
0.015e+034PtpAffx.225775.1.S1_atpmrna45365hypothetical protein-9e-2At5g01020protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-344Arabidopsis thalianaAt1g28680839768transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF---C.G.S.X.
0.102e-1171Glycine maxGma.8744.1.S1_atCD401553--9e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)C.G.S.X.
0.022e+034Hordeum vulgareHA12K13u_s_atHA12K13u--2e-19At1g52740HTA9 (HISTONE H2A PROTEIN 9)C.G.S.X.
0.012e+036Oryza sativaOs.55896.1.S1_at---0C.G.S.X.
0.026e-240Triticum aestivumTa.26344.1.A1_atCD490771--6e+0At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)C.G.S.X.
0.353e-53208Vitis vinifera1620867_atCK138217.1hypothetical protein LOC100246928-8e-2At1g28680transferase family proteinC.G.S.X.
0.021e+034Zea maysZm.14473.3.A1_atBE345005--3e-14At4g34110PAB2 (POLY(A) BINDING 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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