CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID PtpAffx.203463.1.S1_at

Gene name autoinhibited H+ ATPase

Organism Populus trichocarpa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 87.0 PtpAffx.203463.1.S1_at pmrna6897 autoinhibited H+ ATPase - 1e-44 At3g42640 AHA8 (Arabidopsis H(+)-ATPase 8) S.X. H.G.
0.43 69.7 PtpAffx.206787.1.S1_at pmrna13472 hypothetical protein - 7e-2 At1g11440 - S.X. H.G.
0.27 47.1 PtpAffx.147823.2.A1_at CV227944 hypothetical protein - 8e-2 At4g29130 HXK1 (HEXOKINASE 1) S.X. H.G.
0.21 36.5 PtpAffx.30743.3.S1_s_at BU870923 hypothetical protein - 9e-2 At1g32900 starch synthase, putative S.X. H.G.
0.09 14.6 PtpAffx.204279.1.S1_at pmrna8412 hypothetical protein - 1e-5 At5g42560 abscisic acid-responsive HVA22 family protein S.X. H.G.
0.04 6.9 PtpAffx.52716.3.A1_at CV259272 hypothetical protein - 4e+0 At2g20605 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.2 100.0 GSM327660 Populus balsamifera_Male_Catkin_midday_2 GSE13990 Populus balsamifera developmental tissue series
7.7 98.3 GSM327657 Populus balsamifera_Female_Catkin_midday_2 GSE13990 Populus balsamifera developmental tissue series
6.3 97.7 GSM327658 Populus balsamifera_Female_Catkin_midday_3 GSE13990 Populus balsamifera developmental tissue series
4.8 96.4 GSM327656 Populus balsamifera_Female_Catkin_midday_1 GSE13990 Populus balsamifera developmental tissue series
4.3 95.8 GSM362888 Clone1979_LPI5_N+_4w_rep2 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
4.2 95.6 GSM362889 Clone1979_LPI5_N-_4w_rep1 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3 89.8 GSM327659 Populus balsamifera_Male_Catkin_midday_1 GSE13990 Populus balsamifera developmental tissue series
2.0 88.0 GSM362884 Clone1979_LPI2_N+_4w_rep2 GSE14515 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.6 84.5 GSM372094 Clone3200_LPI5_N+_4w_rep2 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.5 83.5 GSM372089 Clone3200_LPI2_N+_4w_rep1 GSE14893 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.89 0 3479 PtpAffx.200192.1.S1_at pmrna360 autoinhibited H+ ATPase - 1e-59 At1g80660 AHA9 C.G. S.X.
0.33 0 813 PtpAffx.205594.1.S1_at pmrna11047 autoinhibited H+ ATPase - 5e-37 At1g80660 AHA9 C.G. S.X.
0.51 2e-93 345 PtpAffx.205941.1.S1_at pmrna11790 autoinhibited H+ ATPase - 2e-98 At3g42640 AHA8 (Arabidopsis H(+)-ATPase 8) C.G. S.X.
0.54 1e-60 236 PtpAffx.214487.1.S1_at pmrna28174 autoinhibited H+ ATPase - 3e-128 At3g42640 AHA8 (Arabidopsis H(+)-ATPase 8) C.G. S.X.
0.50 3e-58 228 PtpAffx.206500.1.S1_at pmrna12893 autoinhibited H+ ATPase - 5e-130 At3g42640 AHA8 (Arabidopsis H(+)-ATPase 8) C.G. S.X.
0.27 4e-51 204 PtpAffx.595.1.S1_s_at CV253931 autoinhibited H+ ATPase - 9e-122 At2g24520 AHA5 (Arabidopsis H(+)-ATPase 5) C.G. S.X.
0.20 6e-47 190 PtpAffx.14414.1.S1_at CN524429 autoinhibited H+ ATPase /// autoinhibited H+ ATPase - 0 At3g47950 AHA4 C.G. S.X.
0.29 3e-36 155 PtpAffx.221106.1.S1_at pmrna37703 autoinhibited H+ ATPase - 9e-147 At3g60330 AHA7 (Arabidopsis H(+)-ATPase 7) C.G. S.X.
0.20 8e-34 147 PtpAffx.142862.1.S1_at BU884336 autoinhibited H+ ATPase /// autoinhibited H+ ATPase - 3e-85 At4g30190 AHA2 C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.52 1e-44 182 Arabidopsis thaliana At3g42640 823281 AHA8 (Arabidopsis H(+)-ATPase 8) F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAV - - - C.G. S.X.
0.17 3e-39 165 Glycine max GmaAffx.10056.1.S1_at BM893172 - - 3e-71 At5g62670 AHA11 (Arabidopsis H(+)-ATPase 11) C.G. S.X.
0.39 1e-51 204 Hordeum vulgare Contig680_at Contig680 - - 1e-99 At4g30190 AHA2 C.G. S.X.
0.34 3e-37 159 Oryza sativa Os04g0656100 AK073066.1 - H(+)-transporting ATPase (EC 3.6.1.35) 4e-103 At4g30190 AHA2 C.G. S.X.
0.35 2e-52 208 Triticum aestivum Ta.28364.1.S1_at AY543630.1 plasma membrane H+-ATPase - 1e-97 At4g30190 AHA2 C.G. S.X.
0.21 3e-48 192 Vitis vinifera 1621002_at CF208524 hypothetical protein LOC100254244 - 6e-101 At2g24520 AHA5 (Arabidopsis H(+)-ATPase 5) C.G. S.X.
0.32 2e-19 97 Zea mays Zm.13376.1.S1_s_at X85805.1 plasma-membrane H+ATPase2 /// proton-exporting ATPase - 2e-95 At4g30190 AHA2 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage