Gene omics information

Query gene ID PtpAffx.203198.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.203198.1.S1_atpmrna6338hypothetical protein-6e-8At1g62960ACS10 (ACC SYNTHASE 10)S.X.H.G.
0.4369.7Ptp.1227.1.S1_atCV256574hypothetical protein-6e-59At1g08490CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE)S.X.H.G.
0.3559.7Ptp.2632.1.S1_atCK111660--6e-72Atcg00710-S.X.H.G.
0.3559.7PtpAffx.22402.1.A1_atCX173202--3e-32At5g12130PDE149 (PIGMENT DEFECTIVE 149)S.X.H.G.
0.1830.8PtpAffx.1027.1.A1_a_atCV254661hypothetical protein-6e-16At1g63010SPX (SYG1/Pho81/XPR1) domain-containing proteinS.X.H.G.
0.1830.8PtpAffx.208772.1.S1_atpmrna17387hypothetical protein-4e-92At2g32040integral membrane transporter family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.099.2GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
5.897.4GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
4.495.9GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
4.395.8GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplar
4.095.3GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.995.1GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.794.7GSM372042Clone1979_LPI5_N-_8w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.694.5GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
3.293.5GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
3.193.2GSM372043Clone1979_LPI5_N-_8w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.247e-30133PtpAffx.213034.1.S1_atpmrna25505hypothetical protein-4e-15At5g51690ACS12C.G.S.X.
0.037e-240PtpAffx.206387.1.S1_atpmrna126871-aminocyclopropane-1-carboxylate-5e-14At4g26200ACS7C.G.S.X.
0.027e-240PtpAffx.202671.1.S1_atpmrna5326hypothetical protein-7e-3At4g17060unknown proteinC.G.S.X.
0.027e-240PtpAffx.202003.1.S1_atpmrna39961-aminocyclopropane-1-carboxylate-2e-22At4g08040ACS11C.G.S.X.
0.013e-138PtpAffx.224613.1.S1_atpmrna43317hypothetical protein-3e-19At1g70450protein kinase family proteinC.G.S.X.
0.013e-138PtpAffx.213056.1.S1_atpmrna25549hypothetical protein-1e-2At1g53645hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.021e+036PtpAffx.653.14.A1_s_atCX173034hypothetical protein-3e-4At1g70470unknown proteinC.G.S.X.
0.011e+036PtpAffx.45799.1.S1_atCK094406--3e-1At4g33490aspartic-type endopeptidaseC.G.S.X.
0.011e+036PtpAffx.225079.1.S1_atpmrna44172hypothetical protein-5e-24At4g30360ATCNGC17C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.116e-859Arabidopsis thalianaAt1g62960842598ACS10 (ACC SYNTHASE 10)Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.---C.G.S.X.
0.232e-1481Glycine maxGmaAffx.85309.1.S1_atBE209956--3e-1At3g10860ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putativeC.G.S.X.
0.084e-756Hordeum vulgareContig9131_s_atContig9131--3e+0At5g51690ACS12C.G.S.X.
0.083e-552Oryza sativaOs06g0130400AK065212.1-1-aminocyclopropane-1-carboxylate synthase familyprotein1e+0At1g62960ACS10 (ACC SYNTHASE 10)C.G.S.X.
0.064e-344Triticum aestivumTa.24341.1.S1_x_atCA6035801-aminocyclopropane-1-carboxylate synthase-1e+1At5g48210unknown proteinC.G.S.X.
0.024e-342Vitis vinifera1612551_atCF605967hypothetical protein LOC100251825-4e+0At3g19650cyclin-relatedC.G.S.X.
0.021e+034Zea maysZm.4387.1.A1_atCF627716hypothetical protein LOC100191315-4e+0At5g40590DC1 domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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