Gene omics information

Query gene ID PtpAffx.203177.1.S1_x_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7091.7PtpAffx.203177.1.S1_x_atpmrna6297hypothetical protein-5e-27At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)S.X.H.G.
0.6187.0PtpAffx.215867.1.S1_atpmrna30303hypothetical protein-9e-8At3g05900neurofilament protein-relatedS.X.H.G.
0.5582.2PtpAffx.74706.1.A1_atCV243425hypothetical protein-7e-30At3g17210HS1 (HEAT STABLE PROTEIN 1)S.X.H.G.
0.5279.4Ptp.6302.1.A1_atCV242506--1e+0At5g38344transmembrane receptorS.X.H.G.
0.5078.6PtpAffx.249.19.A1_x_atCK320862--2e+0At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)S.X.H.G.
0.4774.6PtpAffx.249.19.A1_atCK320862--2e+0At4g36740ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)S.X.H.G.
0.4572.3PtpAffx.211754.1.S1_atpmrna23032hypothetical protein-4e-62At4g02350exocyst complex subunit Sec15-like family proteinS.X.H.G.
0.4268.6PtpAffx.225060.1.S1_atpmrna44141hypothetical protein-3e-24At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)S.X.H.G.
0.4067.0PtpAffx.13681.2.S1_atCV268082hypothetical protein-1e+1At5g65420CYCD4S.X.H.G.
0.3863.7PtpAffx.10869.2.S1_a_atCV242416f-box family protein-6e-11At4g00755F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.799.5GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
14.599.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue series
13.899.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
12.199.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
9.098.7GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
8.798.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue series
7.598.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
5.196.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
1.279.6GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
1.076.2GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0003360PtpAffx.203177.1.S1_atpmrna6297hypothetical protein-5e-27At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.6401340PtpAffx.37646.1.S1_s_atCF232194hypothetical protein-4e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.342e-153543Ptp.6371.1.S1_atBP931690hypothetical protein-3e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.427e-147521PtpAffx.37646.2.A1_atCV243599hypothetical protein-2e+0At3g05860MADS-box protein (AGL45)C.G.S.X.
0.051e-965PtpAffx.5623.1.S1_atCV226973hypothetical protein-3e-5At2g25940ALPHA-VPE (alpha-vacuolar processing enzyme)C.G.S.X.
0.111e-965Ptp.5984.1.S1_s_atCV229997hypothetical protein-2e-91At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.145e-963PtpAffx.12874.1.S1_s_atCF229462hypothetical protein-7e-24At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.082e-861PtpAffx.207475.1.S1_atpmrna14841hypothetical protein-1e-14At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.027e-240PtpAffx.95018.1.A1_s_atCV263305hypothetical protein-1e-14At1g18200AtRABA6b (Arabidopsis Rab GTPase homolog A6b)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.215e-27123Arabidopsis thalianaAt1g62710842569BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.---C.G.S.X.
0.401e-49198Glycine maxGma.8481.1.S1_atAF169019.1seed maturation protein PM40-4e-28At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.097e-652Hordeum vulgareContig3372_s_atContig3372--6e-2At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.175e-1377Oryza sativaOs02g0644000AB081464.1-C13 endopeptidase NP1 (Fragment)2e-23At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.161e-656Triticum aestivumTa.6205.1.S1_atCD895236--8e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.021e+034Vitis vinifera1610605_atCF372576--7e-1At3g51200auxin-responsive family proteinC.G.S.X.
0.157e-1891Zea maysZm.12714.1.S1_atAY106221.1vacuolar processing enzyme, beta-isozyme-3e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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