Gene omics information

Query gene ID PtpAffx.203071.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7091.7PtpAffx.203071.1.S1_atpmrna6078hypothetical protein-1e-12At3g51290proline-rich family proteinS.X.H.G.
0.5380.5PtpAffx.9143.1.A1_atCV241227hypothetical protein-2e-1At4g30820cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-relatedS.X.H.G.
0.1932.7PtpAffx.23625.3.A1_a_atCV230836hypothetical protein-7e-12At3g17300-S.X.H.G.
0.1830.8PtpAffx.58664.1.S1_atCV275946hypothetical protein-5e-20At1g47740unknown proteinS.X.H.G.
0.1321.6PtpAffx.206271.1.S1_atpmrna12436hypothetical protein-9e-41At3g53850-S.X.H.G.
0.1219.6PtpAffx.56685.1.S1_atCV256101hypothetical protein-2e-29At4g38150pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.1118.1PtpAffx.42120.1.A1_atCV226342hypothetical protein-1e-13At3g46870pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.0914.6PtpAffx.48934.1.S1_atDN502071hypothetical protein-6e-4At3g57950unknown proteinS.X.H.G.
0.069.8PtpAffx.24898.1.A1_atCV242273hypothetical protein-2e-1Atmg01050-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.398.5GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue series
5.697.2GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue series
4.395.8GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue series
3.995.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue series
3.594.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.594.3GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
2.892.1GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue series
2.791.8GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue series
2.490.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8201477PtpAffx.225670.1.S1_atpmrna45186hypothetical protein-7e-11At3g51290proline-rich family proteinC.G.S.X.
0.024e-448PtpAffx.206196.1.S1_atpmrna12304hypothetical protein-4e-19At2g19090unknown proteinC.G.S.X.
0.026e-344PtpAffx.51517.1.A1_atCV254879hypothetical protein-4e-1At3g59640glycine-rich proteinC.G.S.X.
0.029e-240PtpAffx.3469.1.S1_atDN499706hypothetical protein-1e-2At5g22370QQT1 (QUATRE-QUART 1)C.G.S.X.
0.029e-240PtpAffx.206374.1.S1_atpmrna12653hypothetical protein-2e-7At5g57070hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.019e-240Ptp.5600.1.S1_s_atDN487515hypothetical protein-6e+0At5g18040unknown proteinC.G.S.X.
0.023e-138PtpAffx.71009.1.A1_atCV235168hypothetical protein-1e-7At3g60320DNA bindingC.G.S.X.
0.023e-138PtpAffx.201097.1.S1_atpmrna2166hypothetical protein-1e-4At5g56140KH domain-containing proteinC.G.S.X.
0.011e+036PtpAffx.87935.2.S1_a_atBP923548f-box family protein-4e-23At3g26810AFB2 (AUXIN SIGNALING F-BOX 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.281e-1275Arabidopsis thalianaAt3g51290824292proline-rich family proteinF:unknown;P:N-terminal protein myristoylation;C:unknown;MPOBFVA---C.G.S.X.
0.011e+036Glycine maxGmaAffx.70145.1.S1_atCA783188--3e-10At4g39790unknown proteinC.G.S.X.
0.035e-136Hordeum vulgareContig9904_atContig9904--1e-1At1g54215proline-rich family proteinC.G.S.X.
0.049e-963Oryza sativaOs09g05387009637.m03102-Protein of unknown function DUF630 domaincontaining protein1e-6At3g51290proline-rich family proteinC.G.S.X.
0.021e+036Triticum aestivumTaAffx.117133.1.S1_x_atBQ609653--2e-1At3g49300proline-rich family proteinC.G.S.X.
0.027e-238Vitis vinifera1619399_s_atCB914618--1e-1At2g30560glycine-rich proteinC.G.S.X.
0.062e-1273Zea maysZm.5788.1.A1_atAI600957hypothetical protein LOC100280278-5e+0At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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