Gene omics information

Query gene ID PtpAffx.203035.1.S1_at
Gene name AP2/ERF domain-containing transcription factor
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.2PtpAffx.203035.1.S1_atpmrna6011AP2/ERF domain-containing transcription factor-3e-2At2g47520AP2 domain-containing transcription factor, putativeS.X.H.G.
0.9499.6PtpAffx.9959.1.A1_atBP936055hypothetical protein-1e+0At3g59450calcium-binding EF hand family proteinS.X.H.G.
0.9097.9PtpAffx.8577.2.A1_atCV256116--2e-31At4g08950EXO (EXORDIUM)S.X.H.G.
0.8797.5PtpAffx.119343.2.A1_a_atBP936124hypothetical protein-4e-6At4g29780unknown proteinS.X.H.G.
0.8697.4PtpAffx.8810.1.S1_atCK096534AP2/ERF domain-containing transcription factor /// AP2/ERF domain-containing transcription factor-2e-34At1g21910AP2 domain-containing transcription factor family proteinS.X.H.G.
0.8597.2PtpAffx.158361.1.S1_atCA822309--1e+0At3g47510unknown proteinS.X.H.G.
0.8597.2PtpAffx.204670.1.S1_atpmrna9194AP2/ERF domain-containing transcription factor-7e-9At1g43160RAP2.6 (related to AP2 6)S.X.H.G.
0.8597.2PtpAffx.93687.1.S1_atBP927882AP2/ERF domain-containing transcription factor-1e+0At1g71450AP2 domain-containing transcription factor, putativeS.X.H.G.
0.8497.1PtpAffx.54562.1.A1_atCV243605AP2/ERF domain-containing transcription factor-8e-31At5g51990CBF4 (C- REPEAT-BINDING FACTOR 4)S.X.H.G.
0.8397.0PtpAffx.215817.1.S1_atpmrna30229AP2/ERF domain-containing transcription factor-8e-7At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
41.4100.0GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplar
38.4100.0GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
1.381.0GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
1.279.6GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
1.178.0GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
0.974.2GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
0.872.0GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplar
0.872.0GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplar
0.666.6GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.609e-99361Ptp.3747.1.S1_s_atDN488219AP2/ERF domain-containing transcription factor-2e-1At5g43410ethylene-responsive factor, putativeC.G.S.X.
0.057e-1065PtpAffx.42822.1.A1_atCX177625AP2/ERF domain-containing transcription factor-7e-13At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.077e-446Ptp.3323.1.S1_s_atCV267890AP2/ERF domain-containing transcription factor-1e-11At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.073e-344PtpAffx.200313.1.S1_atpmrna620AP2/ERF domain-containing transcription factor-7e-10At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.043e-344PtpAffx.102143.1.A1_s_atCV235917AP2/ERF domain-containing transcription factor-3e-10At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.034e-240PtpAffx.208714.1.S1_atpmrna17280AP2/ERF domain-containing transcription factor-6e-9At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)C.G.S.X.
0.022e-138PtpAffx.81414.1.S1_atDN496107hypothetical protein-6e-7At5g02750zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.032e-138PtpAffx.222832.1.S1_atpmrna40507hypothetical protein-5e+0At5g66000unknown proteinC.G.S.X.
0.032e-138PtpAffx.219066.1.S1_atpmrna34870hypothetical protein-4e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-240Arabidopsis thalianaAt2g47520819365AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.---C.G.S.X.
0.117e-756Glycine maxGma.15943.2.S1_atBE057404--2e-5At2g33710AP2 domain-containing transcription factor family proteinC.G.S.X.
0.041e-654Hordeum vulgareContig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.044e-344Oryza sativaOs03g0150200AY339376.1-Ethylene-responsive element binding protein8e-2At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.052e-344Triticum aestivumTaAffx.16192.1.S1_atBQ169008--1e-8At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.124e-1167Vitis vinifera1613698_atCF403989hypothetical protein LOC100242632-7e-6At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.053e-342Zea maysZm.18520.1.A1_atCF632042--8e-3At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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