Gene omics information

Query gene ID PtpAffx.202610.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8096.0PtpAffx.202610.1.S1_atpmrna5222hypothetical protein-2e-25At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)S.X.H.G.
0.5582.2PtpAffx.153855.1.A1_atCV239763hypothetical protein-4e+0At1g65290mtACP2 (mitochondrial acyl carrier protein 2)S.X.H.G.
0.3863.7PtpAffx.11630.1.A1_atCV258476--1e+0At4g00850GIF3 (GRF1-INTERACTING FACTOR 3)S.X.H.G.
0.2950.5PtpAffx.206538.1.S1_atpmrna12970hypothetical protein-3e+0At5g5924040S ribosomal protein S8 (RPS8B)S.X.H.G.
0.2747.1PtpAffx.140124.1.A1_atCV271346--2e-3At1g47750PEX11A (PEROXIN 11A)S.X.H.G.
0.2238.3PtpAffx.115135.1.A1_atCV231588hypothetical protein-2e-16At3g54800pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.9100.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
13.699.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
9.198.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
9.098.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue series
5.497.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue series
4.195.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue series
1.076.2GSM372094Clone3200_LPI5_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.076.2GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
0.974.2GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
0.769.4GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue series
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8101092PtpAffx.203941.1.S1_atpmrna7776hypothetical protein-1e-32At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.373e-46186PtpAffx.208919.1.S1_atpmrna17686hypothetical protein-8e-3At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.294e-24113PtpAffx.208031.1.S1_atpmrna15946hypothetical protein-3e-11At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.077e-756PtpAffx.139092.1.S1_atCF230457hypothetical protein-2e-15At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.173e-654PtpAffx.21027.1.A1_atBP931070hypothetical protein-1e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.022e-138PtpAffx.215571.1.S1_atpmrna29842NAC domain protein, IPR003441-5e-60At4g10350ANAC070 (Arabidopsis NAC domain containing protein 70)C.G.S.X.
0.022e-138PtpAffx.204418.1.S1_atpmrna8687hypothetical protein-2e-9At5g21050-C.G.S.X.
0.017e-136PtpAffx.221602.1.S1_atpmrna38570--7e-1At1g04800glycine-rich proteinC.G.S.X.
0.027e-136PtpAffx.160203.1.A1_atCV242750--1e+0At5g55190RAN3 (RAN GTPASE 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.462e-25117Arabidopsis thalianaAt3g02600821299LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)Encodes phosphatidic acid phosphatase. Expressed during germination.---C.G.S.X.
0.141e-552Glycine maxGmaAffx.82713.1.S1_atBM308798--5e-6At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.107e-1167Hordeum vulgareContig17857_atContig17857--4e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.134e-1273Oryza sativaOs08g0359100AK067740.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)2e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)C.G.S.X.
0.111e-448Triticum aestivumTaAffx.83708.1.S1_atCA653428--1e-3At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.111e-859Vitis vinifera1621834_atBQ794561hypothetical protein LOC100254175-2e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)C.G.S.X.
0.172e-1169Zea maysZm.16854.1.S1_atCF674957hypothetical protein LOC100273231-1e-1At3g18220phosphatidic acid phosphatase family protein / PAP2 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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