Gene omics information

Query gene ID PtpAffx.202603.1.S1_at
Gene name hypothetical protein
Organism Populus trichocarpa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5078.6PtpAffx.202603.1.S1_atpmrna5211hypothetical protein-1e-8At2g04080MATE efflux family proteinS.X.H.G.
0.046.9PtpAffx.25959.1.S1_atDN498122hypothetical protein-2e+0At5g20160ribosomal protein L7Ae/L30e/S12e/Gadd45 family proteinS.X.H.G.
0.046.9Ptp.6795.1.S1_atDN489696hypothetical protein-5e-7At1g75310AUL1S.X.H.G.
0.035.2PtpAffx.211936.1.S1_x_atpmrna23439hypothetical protein-3e-38At2g04350long-chain-fatty-acid--CoA ligase family protein / long-chain acyl-CoA synthetase family protein (LACS8)S.X.H.G.
0.012.2PtpAffx.17660.2.S1_s_atCV233145hypothetical protein-1e-7At2g23780zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.012.2PtpAffx.37459.1.S1_atCK090406hypothetical protein-3e-59At2g30590WRKY21S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.597.1GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplar
5.597.1GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplar
4.896.4GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue series
4.696.2GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplar
4.295.6GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue series
3.594.3GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplar
3.393.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue series
3.393.7GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue series
3.393.7GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplar
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.512e-103377PtpAffx.202604.1.S1_atpmrna5212hypothetical protein-3e-3At2g04090MATE efflux family proteinC.G.S.X.
0.544e-68260PtpAffx.217529.1.S1_s_atpmrna32824hypothetical protein-3e-8At2g04080MATE efflux family proteinC.G.S.X.
0.375e-52206PtpAffx.49799.1.A1_atCV270749hypothetical protein-1e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)C.G.S.X.
0.457e-45182PtpAffx.202602.1.S1_atpmrna5210hypothetical protein-1e-8At2g04080MATE efflux family proteinC.G.S.X.
0.215e-1273PtpAffx.212337.1.S1_atpmrna24185--3e-3At1g73700MATE efflux family proteinC.G.S.X.
0.032e-861PtpAffx.221343.1.S1_atpmrna38181--2e-6At1g66760MATE efflux family proteinC.G.S.X.
0.064e-654PtpAffx.214800.1.S1_atpmrna28651hypothetical protein-2e-4At5g52450MATE efflux protein-relatedC.G.S.X.
0.054e-654PtpAffx.214799.1.S1_s_atpmrna28650hypothetical protein-4e-3At2g34360antiporter/ drug transporter/ transporterC.G.S.X.
0.054e-654PtpAffx.214799.1.S1_atpmrna28650hypothetical protein-4e-3At2g34360antiporter/ drug transporter/ transporterC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-861Arabidopsis thalianaAt2g04080814944MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA---C.G.S.X.
0.071e+036Glycine maxGmaAffx.27474.1.S1_atAW597322--1e-4At1g71140MATE efflux family proteinC.G.S.X.
0.021e+034Hordeum vulgareContig24208_atContig24208--1e+0At3g2339060S ribosomal protein L36a/L44 (RPL36aA)C.G.S.X.
0.021e+036Oryza sativaOs.41694.1.S1_at---0C.G.S.X.
0.027e-136Triticum aestivumTaAffx.122371.1.S1_x_atCA620774--2e-1At1g2740060S ribosomal protein L17 (RPL17A)C.G.S.X.
0.028e-134Vitis vinifera1618952_atCF405185--7e-1At4g18890brassinosteroid signalling positive regulator-relatedC.G.S.X.
0.015e+032Zea maysZm.7025.1.A1_atCF047868hypothetical protein LOC100274924-2e-14At5g02502unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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